Gene : Thecc1EG047069 T. cacao v1.1
Defline:  (1 of 1) K14168 - cytoplasmic tRNA 2-thiolation protein 1 (CTU1, NCS6) Genomic Order:  530
Name:  ? Thecc1EG047069 Secondary Identifier:  ? PAC:27457601
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG047069 0.5kb upstream 0.5kb upstream 3678 true scaffold_8: 2508048-2511725 Theobroma cacao
Thecc1EG047069 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 2511226-2511725 Theobroma cacao
Thecc1EG047069 0.5kb downstream 0.5kb downstream 3678 true scaffold_8: 2507548-2511225 Theobroma cacao
Thecc1EG047069 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 2507548-2508047 Theobroma cacao
Thecc1EG047069 1.0kb upstream 1.0kb upstream 4178 true scaffold_8: 2508048-2512225 Theobroma cacao
Thecc1EG047069 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 2511226-2512225 Theobroma cacao
Thecc1EG047069 1.0kb downstream 1.0kb downstream 4178 true scaffold_8: 2507048-2511225 Theobroma cacao
Thecc1EG047069 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 2507048-2508047 Theobroma cacao
Thecc1EG047069 2.0kb upstream 2.0kb upstream 5178 true scaffold_8: 2508048-2513225 Theobroma cacao
Thecc1EG047069 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 2511226-2513225 Theobroma cacao
Thecc1EG047069 2.0kb downstream 2.0kb downstream 5178 true scaffold_8: 2506048-2511225 Theobroma cacao
Thecc1EG047069 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 2506048-2508047 Theobroma cacao
Thecc1EG047069 5.0kb upstream 5.0kb upstream 8178 true scaffold_8: 2508048-2516225 Theobroma cacao
Thecc1EG047069 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 2511226-2516225 Theobroma cacao
Thecc1EG047069 5.0kb downstream 5.0kb downstream 8178 true scaffold_8: 2503048-2511225 Theobroma cacao
Thecc1EG047069 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 2503048-2508047 Theobroma cacao
Thecc1EG047069 10.0kb upstream 10.0kb upstream 13178 true scaffold_8: 2508048-2521225 Theobroma cacao
Thecc1EG047069 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 2511226-2521225 Theobroma cacao
Thecc1EG047069 10.0kb downstream 10.0kb downstream 13178 true scaffold_8: 2498048-2511225 Theobroma cacao
Thecc1EG047069 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 2498048-2508047 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829220 5264 Brassicales-Malvales View MSA
124347026 5266 SBM View MSA
124240042 5268 Malvidae View MSA
124064054 5270 Rosid View MSA
123742084 5271 Pentapetalae View MSA
122790612 5272 Eudicot View MSA
122048376 5273 Angiosperm View MSA
121346123 5274 Embryophyte View MSA
123424890 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain