Gene : Thecc1EG036616 T. cacao v1.1
Defline:  (1 of 119) PF00847 - AP2 domain (AP2) Genomic Order:  1987
Name:  ? Thecc1EG036616 Secondary Identifier:  ? PAC:27456524
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG036616 0.5kb upstream 0.5kb upstream 1066 true scaffold_8: 20507430-20508495 Theobroma cacao
Thecc1EG036616 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 20507430-20507929 Theobroma cacao
Thecc1EG036616 0.5kb downstream 0.5kb downstream 1066 true scaffold_8: 20507930-20508995 Theobroma cacao
Thecc1EG036616 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 20508496-20508995 Theobroma cacao
Thecc1EG036616 1.0kb upstream 1.0kb upstream 1566 true scaffold_8: 20506930-20508495 Theobroma cacao
Thecc1EG036616 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 20506930-20507929 Theobroma cacao
Thecc1EG036616 1.0kb downstream 1.0kb downstream 1566 true scaffold_8: 20507930-20509495 Theobroma cacao
Thecc1EG036616 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 20508496-20509495 Theobroma cacao
Thecc1EG036616 2.0kb upstream 2.0kb upstream 2566 true scaffold_8: 20505930-20508495 Theobroma cacao
Thecc1EG036616 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 20505930-20507929 Theobroma cacao
Thecc1EG036616 2.0kb downstream 2.0kb downstream 2566 true scaffold_8: 20507930-20510495 Theobroma cacao
Thecc1EG036616 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 20508496-20510495 Theobroma cacao
Thecc1EG036616 5.0kb upstream 5.0kb upstream 5566 true scaffold_8: 20502930-20508495 Theobroma cacao
Thecc1EG036616 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 20502930-20507929 Theobroma cacao
Thecc1EG036616 5.0kb downstream 5.0kb downstream 5566 true scaffold_8: 20507930-20513495 Theobroma cacao
Thecc1EG036616 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 20508496-20513495 Theobroma cacao
Thecc1EG036616 10.0kb upstream 10.0kb upstream 10566 true scaffold_8: 20497930-20508495 Theobroma cacao
Thecc1EG036616 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 20497930-20507929 Theobroma cacao
Thecc1EG036616 10.0kb downstream 10.0kb downstream 10566 true scaffold_8: 20507930-20518495 Theobroma cacao
Thecc1EG036616 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 20508496-20518495 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123821990 5264 Brassicales-Malvales Singleton cluster - no MSA
124318146 5266 SBM Singleton cluster - no MSA
124248352 5268 Malvidae View MSA
124037540 5270 Rosid View MSA
123753503 5271 Pentapetalae View MSA
122795493 5272 Eudicot View MSA
122048706 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain