Gene : Thecc1EG036592 T. cacao v1.1

Defline:  (1 of 1) K15210 - snRNA-activating protein complex subunit 3 (SNAPC3) Genomic Order:  1977
Name:  ? Thecc1EG036592 Secondary Identifier:  ? PAC:27458160

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG036592 0.5kb upstream 0.5kb upstream 5604 true scaffold_8: 20258771-20264374 Theobroma cacao
Thecc1EG036592 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 20258771-20259270 Theobroma cacao
Thecc1EG036592 0.5kb downstream 0.5kb downstream 5604 true scaffold_8: 20259271-20264874 Theobroma cacao
Thecc1EG036592 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 20264375-20264874 Theobroma cacao
Thecc1EG036592 1.0kb upstream 1.0kb upstream 6104 true scaffold_8: 20258271-20264374 Theobroma cacao
Thecc1EG036592 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 20258271-20259270 Theobroma cacao
Thecc1EG036592 1.0kb downstream 1.0kb downstream 6104 true scaffold_8: 20259271-20265374 Theobroma cacao
Thecc1EG036592 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 20264375-20265374 Theobroma cacao
Thecc1EG036592 2.0kb upstream 2.0kb upstream 7104 true scaffold_8: 20257271-20264374 Theobroma cacao
Thecc1EG036592 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 20257271-20259270 Theobroma cacao
Thecc1EG036592 2.0kb downstream 2.0kb downstream 7104 true scaffold_8: 20259271-20266374 Theobroma cacao
Thecc1EG036592 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 20264375-20266374 Theobroma cacao
Thecc1EG036592 5.0kb upstream 5.0kb upstream 10104 true scaffold_8: 20254271-20264374 Theobroma cacao
Thecc1EG036592 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 20254271-20259270 Theobroma cacao
Thecc1EG036592 5.0kb downstream 5.0kb downstream 10104 true scaffold_8: 20259271-20269374 Theobroma cacao
Thecc1EG036592 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 20264375-20269374 Theobroma cacao
Thecc1EG036592 10.0kb upstream 10.0kb upstream 15104 true scaffold_8: 20249271-20264374 Theobroma cacao
Thecc1EG036592 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 20249271-20259270 Theobroma cacao
Thecc1EG036592 10.0kb downstream 10.0kb downstream 15104 true scaffold_8: 20259271-20274374 Theobroma cacao
Thecc1EG036592 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 20264375-20274374 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832964 5264 Brassicales-Malvales View MSA
124339872 5266 SBM View MSA
124241510 5268 Malvidae View MSA
124050343 5270 Rosid View MSA
123737692 5271 Pentapetalae View MSA
122795479 5272 Eudicot View MSA
122043985 5273 Angiosperm View MSA
121347836 5274 Embryophyte View MSA
123424819 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain