Gene : Thecc1EG036604 T. cacao v1.1
Defline:  (1 of 4) PTHR11709//PTHR11709:SF118 - MULTI-COPPER OXIDASE // SUBFAMILY NOT NAMED Genomic Order:  1982
Name:  ? Thecc1EG036604 Secondary Identifier:  ? PAC:27458837
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5466 Theobroma cacao pathologic  
Tcacao PWY-6824 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG036604 0.5kb upstream 0.5kb upstream 68509 true scaffold_8: 20389736-20458244 Theobroma cacao
Thecc1EG036604 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 20457745-20458244 Theobroma cacao
Thecc1EG036604 0.5kb downstream 0.5kb downstream 68509 true scaffold_8: 20389236-20457744 Theobroma cacao
Thecc1EG036604 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 20389236-20389735 Theobroma cacao
Thecc1EG036604 1.0kb upstream 1.0kb upstream 69009 true scaffold_8: 20389736-20458744 Theobroma cacao
Thecc1EG036604 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 20457745-20458744 Theobroma cacao
Thecc1EG036604 1.0kb downstream 1.0kb downstream 69009 true scaffold_8: 20388736-20457744 Theobroma cacao
Thecc1EG036604 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 20388736-20389735 Theobroma cacao
Thecc1EG036604 2.0kb upstream 2.0kb upstream 70009 true scaffold_8: 20389736-20459744 Theobroma cacao
Thecc1EG036604 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 20457745-20459744 Theobroma cacao
Thecc1EG036604 2.0kb downstream 2.0kb downstream 70009 true scaffold_8: 20387736-20457744 Theobroma cacao
Thecc1EG036604 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 20387736-20389735 Theobroma cacao
Thecc1EG036604 5.0kb upstream 5.0kb upstream 73009 true scaffold_8: 20389736-20462744 Theobroma cacao
Thecc1EG036604 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 20457745-20462744 Theobroma cacao
Thecc1EG036604 5.0kb downstream 5.0kb downstream 73009 true scaffold_8: 20384736-20457744 Theobroma cacao
Thecc1EG036604 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 20384736-20389735 Theobroma cacao
Thecc1EG036604 10.0kb upstream 10.0kb upstream 78009 true scaffold_8: 20389736-20467744 Theobroma cacao
Thecc1EG036604 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 20457745-20467744 Theobroma cacao
Thecc1EG036604 10.0kb downstream 10.0kb downstream 78009 true scaffold_8: 20379736-20457744 Theobroma cacao
Thecc1EG036604 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 20379736-20389735 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835979 5264 Brassicales-Malvales View MSA
124344617 5266 SBM View MSA
124253162 5268 Malvidae View MSA
124074925 5270 Rosid View MSA
123753088 5271 Pentapetalae View MSA
122795935 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain