Gene : Thecc1EG036541 T. cacao v1.1
Defline:  (1 of 1) PTHR11945//PTHR11945:SF238 - MADS BOX PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  1948
Name:  ? Thecc1EG036541 Secondary Identifier:  ? PAC:27459395
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG036541 0.5kb upstream 0.5kb upstream 17027 true scaffold_8: 19874074-19891100 Theobroma cacao
Thecc1EG036541 0.5kb upstream 0.5kb upstream 500 false scaffold_8: 19890601-19891100 Theobroma cacao
Thecc1EG036541 0.5kb downstream 0.5kb downstream 17027 true scaffold_8: 19873574-19890600 Theobroma cacao
Thecc1EG036541 0.5kb downstream 0.5kb downstream 500 false scaffold_8: 19873574-19874073 Theobroma cacao
Thecc1EG036541 1.0kb upstream 1.0kb upstream 17527 true scaffold_8: 19874074-19891600 Theobroma cacao
Thecc1EG036541 1.0kb upstream 1.0kb upstream 1000 false scaffold_8: 19890601-19891600 Theobroma cacao
Thecc1EG036541 1.0kb downstream 1.0kb downstream 17527 true scaffold_8: 19873074-19890600 Theobroma cacao
Thecc1EG036541 1.0kb downstream 1.0kb downstream 1000 false scaffold_8: 19873074-19874073 Theobroma cacao
Thecc1EG036541 2.0kb upstream 2.0kb upstream 18527 true scaffold_8: 19874074-19892600 Theobroma cacao
Thecc1EG036541 2.0kb upstream 2.0kb upstream 2000 false scaffold_8: 19890601-19892600 Theobroma cacao
Thecc1EG036541 2.0kb downstream 2.0kb downstream 18527 true scaffold_8: 19872074-19890600 Theobroma cacao
Thecc1EG036541 2.0kb downstream 2.0kb downstream 2000 false scaffold_8: 19872074-19874073 Theobroma cacao
Thecc1EG036541 5.0kb upstream 5.0kb upstream 21527 true scaffold_8: 19874074-19895600 Theobroma cacao
Thecc1EG036541 5.0kb upstream 5.0kb upstream 5000 false scaffold_8: 19890601-19895600 Theobroma cacao
Thecc1EG036541 5.0kb downstream 5.0kb downstream 21527 true scaffold_8: 19869074-19890600 Theobroma cacao
Thecc1EG036541 5.0kb downstream 5.0kb downstream 5000 false scaffold_8: 19869074-19874073 Theobroma cacao
Thecc1EG036541 10.0kb upstream 10.0kb upstream 26527 true scaffold_8: 19874074-19900600 Theobroma cacao
Thecc1EG036541 10.0kb upstream 10.0kb upstream 10000 false scaffold_8: 19890601-19900600 Theobroma cacao
Thecc1EG036541 10.0kb downstream 10.0kb downstream 26527 true scaffold_8: 19864074-19890600 Theobroma cacao
Thecc1EG036541 10.0kb downstream 10.0kb downstream 10000 false scaffold_8: 19864074-19874073 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829277 5264 Brassicales-Malvales View MSA
124348180 5266 SBM View MSA
124253433 5268 Malvidae View MSA
124063483 5270 Rosid View MSA
123747867 5271 Pentapetalae View MSA
122793842 5272 Eudicot View MSA
122049629 5273 Angiosperm View MSA
121350957 5274 Embryophyte View MSA
123424057 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain