Gene : Thecc1EG036873 T. cacao v1.1
Defline:  (1 of 1) PTHR31235//PTHR31235:SF9 - FAMILY NOT NAMED // PEROXIDASE 18-RELATED Genomic Order:  121
Name:  ? Thecc1EG036873 Secondary Identifier:  ? PAC:27426319
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5466 Theobroma cacao pathologic  
Tcacao PWY-6824 Theobroma cacao pathologic  
Tcacao PWY-7214 Theobroma cacao pathologic  
Tcacao PWY-7445 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG036873 0.5kb upstream 0.5kb upstream 4273 true scaffold_9: 645825-650097 Theobroma cacao
Thecc1EG036873 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 649598-650097 Theobroma cacao
Thecc1EG036873 0.5kb downstream 0.5kb downstream 4273 true scaffold_9: 645325-649597 Theobroma cacao
Thecc1EG036873 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 645325-645824 Theobroma cacao
Thecc1EG036873 1.0kb upstream 1.0kb upstream 4773 true scaffold_9: 645825-650597 Theobroma cacao
Thecc1EG036873 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 649598-650597 Theobroma cacao
Thecc1EG036873 1.0kb downstream 1.0kb downstream 4773 true scaffold_9: 644825-649597 Theobroma cacao
Thecc1EG036873 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 644825-645824 Theobroma cacao
Thecc1EG036873 2.0kb upstream 2.0kb upstream 5773 true scaffold_9: 645825-651597 Theobroma cacao
Thecc1EG036873 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 649598-651597 Theobroma cacao
Thecc1EG036873 2.0kb downstream 2.0kb downstream 5773 true scaffold_9: 643825-649597 Theobroma cacao
Thecc1EG036873 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 643825-645824 Theobroma cacao
Thecc1EG036873 5.0kb upstream 5.0kb upstream 8773 true scaffold_9: 645825-654597 Theobroma cacao
Thecc1EG036873 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 649598-654597 Theobroma cacao
Thecc1EG036873 5.0kb downstream 5.0kb downstream 8773 true scaffold_9: 640825-649597 Theobroma cacao
Thecc1EG036873 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 640825-645824 Theobroma cacao
Thecc1EG036873 10.0kb upstream 10.0kb upstream 13773 true scaffold_9: 645825-659597 Theobroma cacao
Thecc1EG036873 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 649598-659597 Theobroma cacao
Thecc1EG036873 10.0kb downstream 10.0kb downstream 13773 true scaffold_9: 635825-649597 Theobroma cacao
Thecc1EG036873 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 635825-645824 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040962 5273 Angiosperm View MSA
123836706 5264 Brassicales-Malvales View MSA
124340005 5266 SBM View MSA
124237745 5268 Malvidae View MSA
124067094 5270 Rosid View MSA
123737779 5271 Pentapetalae View MSA
122790271 5272 Eudicot View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain