Gene : Thecc1EG036769 T. cacao v1.1

Defline:  (1 of 6) PF12056 - Protein of unknown function (DUF3537) (DUF3537) Genomic Order:  23
Name:  ? Thecc1EG036769 Secondary Identifier:  ? PAC:27426272

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG036769 0.5kb upstream 0.5kb upstream 3617 true scaffold_9: 181199-184815 Theobroma cacao
Thecc1EG036769 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 181199-181698 Theobroma cacao
Thecc1EG036769 0.5kb downstream 0.5kb downstream 3617 true scaffold_9: 181699-185315 Theobroma cacao
Thecc1EG036769 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 184816-185315 Theobroma cacao
Thecc1EG036769 1.0kb upstream 1.0kb upstream 4117 true scaffold_9: 180699-184815 Theobroma cacao
Thecc1EG036769 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 180699-181698 Theobroma cacao
Thecc1EG036769 1.0kb downstream 1.0kb downstream 4117 true scaffold_9: 181699-185815 Theobroma cacao
Thecc1EG036769 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 184816-185815 Theobroma cacao
Thecc1EG036769 2.0kb upstream 2.0kb upstream 5117 true scaffold_9: 179699-184815 Theobroma cacao
Thecc1EG036769 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 179699-181698 Theobroma cacao
Thecc1EG036769 2.0kb downstream 2.0kb downstream 5117 true scaffold_9: 181699-186815 Theobroma cacao
Thecc1EG036769 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 184816-186815 Theobroma cacao
Thecc1EG036769 5.0kb upstream 5.0kb upstream 8117 true scaffold_9: 176699-184815 Theobroma cacao
Thecc1EG036769 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 176699-181698 Theobroma cacao
Thecc1EG036769 5.0kb downstream 5.0kb downstream 8117 true scaffold_9: 181699-189815 Theobroma cacao
Thecc1EG036769 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 184816-189815 Theobroma cacao
Thecc1EG036769 10.0kb upstream 10.0kb upstream 13117 true scaffold_9: 171699-184815 Theobroma cacao
Thecc1EG036769 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 171699-181698 Theobroma cacao
Thecc1EG036769 10.0kb downstream 10.0kb downstream 13117 true scaffold_9: 181699-194815 Theobroma cacao
Thecc1EG036769 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 184816-194815 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829561 5264 Brassicales-Malvales View MSA
124339488 5266 SBM View MSA
124239574 5268 Malvidae View MSA
124073555 5270 Rosid View MSA
123741575 5271 Pentapetalae View MSA
122793789 5272 Eudicot View MSA
122045087 5273 Angiosperm View MSA
121349766 5274 Embryophyte View MSA
123381435 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain