Gene : Thecc1EG037005 T. cacao v1.1
Defline:  (1 of 4) PTHR18896:SF11 - PHOSPHOLIPASE D ALPHA 1-RELATED Genomic Order:  244
Name:  ? Thecc1EG037005 Secondary Identifier:  ? PAC:27428782
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao LIPASYN-PWY Theobroma cacao pathologic  
Tcacao PWY-3561 Theobroma cacao pathologic  
Tcacao PWY-7039 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037005 0.5kb upstream 0.5kb upstream 5551 true scaffold_9: 1321587-1327137 Theobroma cacao
Thecc1EG037005 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 1326638-1327137 Theobroma cacao
Thecc1EG037005 0.5kb downstream 0.5kb downstream 5551 true scaffold_9: 1321087-1326637 Theobroma cacao
Thecc1EG037005 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 1321087-1321586 Theobroma cacao
Thecc1EG037005 1.0kb upstream 1.0kb upstream 6051 true scaffold_9: 1321587-1327637 Theobroma cacao
Thecc1EG037005 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 1326638-1327637 Theobroma cacao
Thecc1EG037005 1.0kb downstream 1.0kb downstream 6051 true scaffold_9: 1320587-1326637 Theobroma cacao
Thecc1EG037005 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 1320587-1321586 Theobroma cacao
Thecc1EG037005 2.0kb upstream 2.0kb upstream 7051 true scaffold_9: 1321587-1328637 Theobroma cacao
Thecc1EG037005 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 1326638-1328637 Theobroma cacao
Thecc1EG037005 2.0kb downstream 2.0kb downstream 7051 true scaffold_9: 1319587-1326637 Theobroma cacao
Thecc1EG037005 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 1319587-1321586 Theobroma cacao
Thecc1EG037005 5.0kb upstream 5.0kb upstream 10051 true scaffold_9: 1321587-1331637 Theobroma cacao
Thecc1EG037005 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 1326638-1331637 Theobroma cacao
Thecc1EG037005 5.0kb downstream 5.0kb downstream 10051 true scaffold_9: 1316587-1326637 Theobroma cacao
Thecc1EG037005 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 1316587-1321586 Theobroma cacao
Thecc1EG037005 10.0kb upstream 10.0kb upstream 15051 true scaffold_9: 1321587-1336637 Theobroma cacao
Thecc1EG037005 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 1326638-1336637 Theobroma cacao
Thecc1EG037005 10.0kb downstream 10.0kb downstream 15051 true scaffold_9: 1311587-1326637 Theobroma cacao
Thecc1EG037005 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 1311587-1321586 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780184 5273 Angiosperm View MSA
123825200 5264 Brassicales-Malvales View MSA
124320501 5266 SBM View MSA
124248715 5268 Malvidae View MSA
124050775 5270 Rosid View MSA
123745391 5271 Pentapetalae View MSA
122771485 5272 Eudicot View MSA
121051807 5274 Embryophyte View MSA
123428505 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain