Gene : Thecc1EG036966 T. cacao v1.1
Defline:  (1 of 1) PTHR14363//PTHR14363:SF18 - HEPARANASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  204
Name:  ? Thecc1EG036966 Secondary Identifier:  ? PAC:27430328
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7213 Theobroma cacao pathologic  
Tcacao PWY-7214 Theobroma cacao pathologic  
Tcacao PWY-7445 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG036966 0.5kb upstream 0.5kb upstream 4856 true scaffold_9: 1134880-1139735 Theobroma cacao
Thecc1EG036966 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 1134880-1135379 Theobroma cacao
Thecc1EG036966 0.5kb downstream 0.5kb downstream 4856 true scaffold_9: 1135380-1140235 Theobroma cacao
Thecc1EG036966 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 1139736-1140235 Theobroma cacao
Thecc1EG036966 1.0kb upstream 1.0kb upstream 5356 true scaffold_9: 1134380-1139735 Theobroma cacao
Thecc1EG036966 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 1134380-1135379 Theobroma cacao
Thecc1EG036966 1.0kb downstream 1.0kb downstream 5356 true scaffold_9: 1135380-1140735 Theobroma cacao
Thecc1EG036966 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 1139736-1140735 Theobroma cacao
Thecc1EG036966 2.0kb upstream 2.0kb upstream 6356 true scaffold_9: 1133380-1139735 Theobroma cacao
Thecc1EG036966 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 1133380-1135379 Theobroma cacao
Thecc1EG036966 2.0kb downstream 2.0kb downstream 6356 true scaffold_9: 1135380-1141735 Theobroma cacao
Thecc1EG036966 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 1139736-1141735 Theobroma cacao
Thecc1EG036966 5.0kb upstream 5.0kb upstream 9356 true scaffold_9: 1130380-1139735 Theobroma cacao
Thecc1EG036966 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 1130380-1135379 Theobroma cacao
Thecc1EG036966 5.0kb downstream 5.0kb downstream 9356 true scaffold_9: 1135380-1144735 Theobroma cacao
Thecc1EG036966 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 1139736-1144735 Theobroma cacao
Thecc1EG036966 10.0kb upstream 10.0kb upstream 14356 true scaffold_9: 1125380-1139735 Theobroma cacao
Thecc1EG036966 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 1125380-1135379 Theobroma cacao
Thecc1EG036966 10.0kb downstream 10.0kb downstream 14356 true scaffold_9: 1135380-1149735 Theobroma cacao
Thecc1EG036966 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 1139736-1149735 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824753 5264 Brassicales-Malvales View MSA
124347223 5266 SBM View MSA
124245799 5268 Malvidae View MSA
124050858 5270 Rosid View MSA
123745490 5271 Pentapetalae View MSA
122791250 5272 Eudicot View MSA
122042729 5273 Angiosperm View MSA
121348264 5274 Embryophyte View MSA
123380798 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain