Gene : Thecc1EG036972 T. cacao v1.1

Defline:  (1 of 5) K17604 - zinc finger SWIM domain-containing protein 3 (ZSWIM3) Genomic Order:  216
Name:  ? Thecc1EG036972 Secondary Identifier:  ? PAC:27431134

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG036972 0.5kb upstream 0.5kb upstream 5385 true scaffold_9: 1202388-1207772 Theobroma cacao
Thecc1EG036972 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 1202388-1202887 Theobroma cacao
Thecc1EG036972 0.5kb downstream 0.5kb downstream 5385 true scaffold_9: 1202888-1208272 Theobroma cacao
Thecc1EG036972 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 1207773-1208272 Theobroma cacao
Thecc1EG036972 1.0kb upstream 1.0kb upstream 5885 true scaffold_9: 1201888-1207772 Theobroma cacao
Thecc1EG036972 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 1201888-1202887 Theobroma cacao
Thecc1EG036972 1.0kb downstream 1.0kb downstream 5885 true scaffold_9: 1202888-1208772 Theobroma cacao
Thecc1EG036972 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 1207773-1208772 Theobroma cacao
Thecc1EG036972 2.0kb upstream 2.0kb upstream 6885 true scaffold_9: 1200888-1207772 Theobroma cacao
Thecc1EG036972 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 1200888-1202887 Theobroma cacao
Thecc1EG036972 2.0kb downstream 2.0kb downstream 6885 true scaffold_9: 1202888-1209772 Theobroma cacao
Thecc1EG036972 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 1207773-1209772 Theobroma cacao
Thecc1EG036972 5.0kb upstream 5.0kb upstream 9885 true scaffold_9: 1197888-1207772 Theobroma cacao
Thecc1EG036972 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 1197888-1202887 Theobroma cacao
Thecc1EG036972 5.0kb downstream 5.0kb downstream 9885 true scaffold_9: 1202888-1212772 Theobroma cacao
Thecc1EG036972 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 1207773-1212772 Theobroma cacao
Thecc1EG036972 10.0kb upstream 10.0kb upstream 14885 true scaffold_9: 1192888-1207772 Theobroma cacao
Thecc1EG036972 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 1192888-1202887 Theobroma cacao
Thecc1EG036972 10.0kb downstream 10.0kb downstream 14885 true scaffold_9: 1202888-1217772 Theobroma cacao
Thecc1EG036972 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 1207773-1217772 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824870 5264 Brassicales-Malvales View MSA
124320365 5266 SBM View MSA
124248495 5268 Malvidae View MSA
124074797 5270 Rosid View MSA
123752010 5271 Pentapetalae View MSA
122794542 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain