Gene : Thecc1EG036947 T. cacao v1.1
Defline:  (1 of 1) PTHR13109 - NEUROCHONDRIN Genomic Order:  189
Name:  ? Thecc1EG036947 Secondary Identifier:  ? PAC:27430523
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG036947 0.5kb upstream 0.5kb upstream 7143 true scaffold_9: 1052718-1059860 Theobroma cacao
Thecc1EG036947 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 1052718-1053217 Theobroma cacao
Thecc1EG036947 0.5kb downstream 0.5kb downstream 7143 true scaffold_9: 1053218-1060360 Theobroma cacao
Thecc1EG036947 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 1059861-1060360 Theobroma cacao
Thecc1EG036947 1.0kb upstream 1.0kb upstream 7643 true scaffold_9: 1052218-1059860 Theobroma cacao
Thecc1EG036947 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 1052218-1053217 Theobroma cacao
Thecc1EG036947 1.0kb downstream 1.0kb downstream 7643 true scaffold_9: 1053218-1060860 Theobroma cacao
Thecc1EG036947 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 1059861-1060860 Theobroma cacao
Thecc1EG036947 2.0kb upstream 2.0kb upstream 8643 true scaffold_9: 1051218-1059860 Theobroma cacao
Thecc1EG036947 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 1051218-1053217 Theobroma cacao
Thecc1EG036947 2.0kb downstream 2.0kb downstream 8643 true scaffold_9: 1053218-1061860 Theobroma cacao
Thecc1EG036947 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 1059861-1061860 Theobroma cacao
Thecc1EG036947 5.0kb upstream 5.0kb upstream 11643 true scaffold_9: 1048218-1059860 Theobroma cacao
Thecc1EG036947 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 1048218-1053217 Theobroma cacao
Thecc1EG036947 5.0kb downstream 5.0kb downstream 11643 true scaffold_9: 1053218-1064860 Theobroma cacao
Thecc1EG036947 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 1059861-1064860 Theobroma cacao
Thecc1EG036947 10.0kb upstream 10.0kb upstream 16643 true scaffold_9: 1043218-1059860 Theobroma cacao
Thecc1EG036947 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 1043218-1053217 Theobroma cacao
Thecc1EG036947 10.0kb downstream 10.0kb downstream 16643 true scaffold_9: 1053218-1069860 Theobroma cacao
Thecc1EG036947 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 1059861-1069860 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829362 5264 Brassicales-Malvales View MSA
124340042 5266 SBM View MSA
124244006 5268 Malvidae View MSA
124063922 5270 Rosid View MSA
123739094 5271 Pentapetalae View MSA
122786343 5272 Eudicot View MSA
122047027 5273 Angiosperm View MSA
121345052 5274 Embryophyte View MSA
123426950 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain