Gene : Thecc1EG036896 T. cacao v1.1
Defline:  (1 of 1) PTHR11592:SF11 - PHOSPHOLIPID HYDROPEROXIDE GLUTATHIONE PEROXIDASE 1, CHLOROPLASTIC-RELATED Genomic Order:  142
Name:  ? Thecc1EG036896 Secondary Identifier:  ? PAC:27427487
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-4081 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG036896 0.5kb upstream 0.5kb upstream 2941 true scaffold_9: 732346-735286 Theobroma cacao
Thecc1EG036896 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 734787-735286 Theobroma cacao
Thecc1EG036896 0.5kb downstream 0.5kb downstream 2941 true scaffold_9: 731846-734786 Theobroma cacao
Thecc1EG036896 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 731846-732345 Theobroma cacao
Thecc1EG036896 1.0kb upstream 1.0kb upstream 3441 true scaffold_9: 732346-735786 Theobroma cacao
Thecc1EG036896 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 734787-735786 Theobroma cacao
Thecc1EG036896 1.0kb downstream 1.0kb downstream 3441 true scaffold_9: 731346-734786 Theobroma cacao
Thecc1EG036896 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 731346-732345 Theobroma cacao
Thecc1EG036896 2.0kb upstream 2.0kb upstream 4441 true scaffold_9: 732346-736786 Theobroma cacao
Thecc1EG036896 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 734787-736786 Theobroma cacao
Thecc1EG036896 2.0kb downstream 2.0kb downstream 4441 true scaffold_9: 730346-734786 Theobroma cacao
Thecc1EG036896 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 730346-732345 Theobroma cacao
Thecc1EG036896 5.0kb upstream 5.0kb upstream 7441 true scaffold_9: 732346-739786 Theobroma cacao
Thecc1EG036896 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 734787-739786 Theobroma cacao
Thecc1EG036896 5.0kb downstream 5.0kb downstream 7441 true scaffold_9: 727346-734786 Theobroma cacao
Thecc1EG036896 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 727346-732345 Theobroma cacao
Thecc1EG036896 10.0kb upstream 10.0kb upstream 12441 true scaffold_9: 732346-744786 Theobroma cacao
Thecc1EG036896 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 734787-744786 Theobroma cacao
Thecc1EG036896 10.0kb downstream 10.0kb downstream 12441 true scaffold_9: 722346-734786 Theobroma cacao
Thecc1EG036896 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 722346-732345 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838768 5264 Brassicales-Malvales View MSA
124342773 5266 SBM View MSA
124240030 5268 Malvidae View MSA
124063282 5270 Rosid View MSA
123740898 5271 Pentapetalae View MSA
122792011 5272 Eudicot View MSA
122046042 5273 Angiosperm View MSA
121349724 5274 Embryophyte View MSA
123426849 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain