Gene : Thecc1EG037143 T. cacao v1.1
Defline:  (1 of 2) PTHR11266//PTHR11266:SF35 - PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 // GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MOB24 Genomic Order:  373
Name:  ? Thecc1EG037143 Secondary Identifier:  ? PAC:27428840
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037143 0.5kb upstream 0.5kb upstream 3465 true scaffold_9: 1995741-1999205 Theobroma cacao
Thecc1EG037143 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 1998706-1999205 Theobroma cacao
Thecc1EG037143 0.5kb downstream 0.5kb downstream 3465 true scaffold_9: 1995241-1998705 Theobroma cacao
Thecc1EG037143 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 1995241-1995740 Theobroma cacao
Thecc1EG037143 1.0kb upstream 1.0kb upstream 3965 true scaffold_9: 1995741-1999705 Theobroma cacao
Thecc1EG037143 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 1998706-1999705 Theobroma cacao
Thecc1EG037143 1.0kb downstream 1.0kb downstream 3965 true scaffold_9: 1994741-1998705 Theobroma cacao
Thecc1EG037143 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 1994741-1995740 Theobroma cacao
Thecc1EG037143 2.0kb upstream 2.0kb upstream 4965 true scaffold_9: 1995741-2000705 Theobroma cacao
Thecc1EG037143 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 1998706-2000705 Theobroma cacao
Thecc1EG037143 2.0kb downstream 2.0kb downstream 4965 true scaffold_9: 1993741-1998705 Theobroma cacao
Thecc1EG037143 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 1993741-1995740 Theobroma cacao
Thecc1EG037143 5.0kb upstream 5.0kb upstream 7965 true scaffold_9: 1995741-2003705 Theobroma cacao
Thecc1EG037143 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 1998706-2003705 Theobroma cacao
Thecc1EG037143 5.0kb downstream 5.0kb downstream 7965 true scaffold_9: 1990741-1998705 Theobroma cacao
Thecc1EG037143 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 1990741-1995740 Theobroma cacao
Thecc1EG037143 10.0kb upstream 10.0kb upstream 12965 true scaffold_9: 1995741-2008705 Theobroma cacao
Thecc1EG037143 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 1998706-2008705 Theobroma cacao
Thecc1EG037143 10.0kb downstream 10.0kb downstream 12965 true scaffold_9: 1985741-1998705 Theobroma cacao
Thecc1EG037143 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 1985741-1995740 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835145 5264 Brassicales-Malvales View MSA
124348341 5266 SBM View MSA
124245929 5268 Malvidae View MSA
124069993 5270 Rosid View MSA
123749582 5271 Pentapetalae View MSA
122788568 5272 Eudicot View MSA
122051343 5273 Angiosperm View MSA
121350942 5274 Embryophyte View MSA
123428334 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain