Gene : Thecc1EG037102 T. cacao v1.1
Defline:  (1 of 2) PTHR11177//PTHR11177:SF219 - CHITINASE // CHITINASE-LIKE PROTEIN-RELATED Genomic Order:  331
Name:  ? Thecc1EG037102 Secondary Identifier:  ? PAC:27429986
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6902 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037102 0.5kb upstream 0.5kb upstream 3161 true scaffold_9: 1738458-1741618 Theobroma cacao
Thecc1EG037102 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 1738458-1738957 Theobroma cacao
Thecc1EG037102 0.5kb downstream 0.5kb downstream 3161 true scaffold_9: 1738958-1742118 Theobroma cacao
Thecc1EG037102 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 1741619-1742118 Theobroma cacao
Thecc1EG037102 1.0kb upstream 1.0kb upstream 3661 true scaffold_9: 1737958-1741618 Theobroma cacao
Thecc1EG037102 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 1737958-1738957 Theobroma cacao
Thecc1EG037102 1.0kb downstream 1.0kb downstream 3661 true scaffold_9: 1738958-1742618 Theobroma cacao
Thecc1EG037102 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 1741619-1742618 Theobroma cacao
Thecc1EG037102 2.0kb upstream 2.0kb upstream 4661 true scaffold_9: 1736958-1741618 Theobroma cacao
Thecc1EG037102 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 1736958-1738957 Theobroma cacao
Thecc1EG037102 2.0kb downstream 2.0kb downstream 4661 true scaffold_9: 1738958-1743618 Theobroma cacao
Thecc1EG037102 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 1741619-1743618 Theobroma cacao
Thecc1EG037102 5.0kb upstream 5.0kb upstream 7661 true scaffold_9: 1733958-1741618 Theobroma cacao
Thecc1EG037102 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 1733958-1738957 Theobroma cacao
Thecc1EG037102 5.0kb downstream 5.0kb downstream 7661 true scaffold_9: 1738958-1746618 Theobroma cacao
Thecc1EG037102 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 1741619-1746618 Theobroma cacao
Thecc1EG037102 10.0kb upstream 10.0kb upstream 12661 true scaffold_9: 1728958-1741618 Theobroma cacao
Thecc1EG037102 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 1728958-1738957 Theobroma cacao
Thecc1EG037102 10.0kb downstream 10.0kb downstream 12661 true scaffold_9: 1738958-1751618 Theobroma cacao
Thecc1EG037102 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 1741619-1751618 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831557 5264 Brassicales-Malvales View MSA
124339327 5266 SBM View MSA
124253771 5268 Malvidae View MSA
124068556 5270 Rosid View MSA
123750744 5271 Pentapetalae View MSA
122797322 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain