Gene : Thecc1EG037103 T. cacao v1.1

Defline:  (1 of 3) PF00704//PF07714 - Glycosyl hydrolases family 18 (Glyco_hydro_18) // Protein tyrosine kinase (Pkinase_Tyr) Genomic Order:  332
Name:  ? Thecc1EG037103 Secondary Identifier:  ? PAC:27428778

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037103 0.5kb upstream 0.5kb upstream 4355 true scaffold_9: 1741721-1746075 Theobroma cacao
Thecc1EG037103 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 1741721-1742220 Theobroma cacao
Thecc1EG037103 0.5kb downstream 0.5kb downstream 4355 true scaffold_9: 1742221-1746575 Theobroma cacao
Thecc1EG037103 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 1746076-1746575 Theobroma cacao
Thecc1EG037103 1.0kb upstream 1.0kb upstream 4855 true scaffold_9: 1741221-1746075 Theobroma cacao
Thecc1EG037103 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 1741221-1742220 Theobroma cacao
Thecc1EG037103 1.0kb downstream 1.0kb downstream 4855 true scaffold_9: 1742221-1747075 Theobroma cacao
Thecc1EG037103 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 1746076-1747075 Theobroma cacao
Thecc1EG037103 2.0kb upstream 2.0kb upstream 5855 true scaffold_9: 1740221-1746075 Theobroma cacao
Thecc1EG037103 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 1740221-1742220 Theobroma cacao
Thecc1EG037103 2.0kb downstream 2.0kb downstream 5855 true scaffold_9: 1742221-1748075 Theobroma cacao
Thecc1EG037103 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 1746076-1748075 Theobroma cacao
Thecc1EG037103 5.0kb upstream 5.0kb upstream 8855 true scaffold_9: 1737221-1746075 Theobroma cacao
Thecc1EG037103 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 1737221-1742220 Theobroma cacao
Thecc1EG037103 5.0kb downstream 5.0kb downstream 8855 true scaffold_9: 1742221-1751075 Theobroma cacao
Thecc1EG037103 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 1746076-1751075 Theobroma cacao
Thecc1EG037103 10.0kb upstream 10.0kb upstream 13855 true scaffold_9: 1732221-1746075 Theobroma cacao
Thecc1EG037103 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 1732221-1742220 Theobroma cacao
Thecc1EG037103 10.0kb downstream 10.0kb downstream 13855 true scaffold_9: 1742221-1756075 Theobroma cacao
Thecc1EG037103 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 1746076-1756075 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122032298 5273 Angiosperm View MSA
123824349 5264 Brassicales-Malvales View MSA
124347073 5266 SBM View MSA
124245294 5268 Malvidae View MSA
124050576 5270 Rosid View MSA
123750230 5271 Pentapetalae View MSA
122773533 5272 Eudicot View MSA
121301209 5274 Embryophyte View MSA
123338882 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain