Gene : Thecc1EG037112 T. cacao v1.1
Defline:  (1 of 3) PTHR11177//PTHR11177:SF208 - CHITINASE // SUBFAMILY NOT NAMED Genomic Order:  340
Name:  ? Thecc1EG037112 Secondary Identifier:  ? PAC:27429588
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6902 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037112 0.5kb upstream 0.5kb upstream 2475 true scaffold_9: 1779359-1781833 Theobroma cacao
Thecc1EG037112 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 1781334-1781833 Theobroma cacao
Thecc1EG037112 0.5kb downstream 0.5kb downstream 2475 true scaffold_9: 1778859-1781333 Theobroma cacao
Thecc1EG037112 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 1778859-1779358 Theobroma cacao
Thecc1EG037112 1.0kb upstream 1.0kb upstream 2975 true scaffold_9: 1779359-1782333 Theobroma cacao
Thecc1EG037112 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 1781334-1782333 Theobroma cacao
Thecc1EG037112 1.0kb downstream 1.0kb downstream 2975 true scaffold_9: 1778359-1781333 Theobroma cacao
Thecc1EG037112 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 1778359-1779358 Theobroma cacao
Thecc1EG037112 2.0kb upstream 2.0kb upstream 3975 true scaffold_9: 1779359-1783333 Theobroma cacao
Thecc1EG037112 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 1781334-1783333 Theobroma cacao
Thecc1EG037112 2.0kb downstream 2.0kb downstream 3975 true scaffold_9: 1777359-1781333 Theobroma cacao
Thecc1EG037112 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 1777359-1779358 Theobroma cacao
Thecc1EG037112 5.0kb upstream 5.0kb upstream 6975 true scaffold_9: 1779359-1786333 Theobroma cacao
Thecc1EG037112 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 1781334-1786333 Theobroma cacao
Thecc1EG037112 5.0kb downstream 5.0kb downstream 6975 true scaffold_9: 1774359-1781333 Theobroma cacao
Thecc1EG037112 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 1774359-1779358 Theobroma cacao
Thecc1EG037112 10.0kb upstream 10.0kb upstream 11975 true scaffold_9: 1779359-1791333 Theobroma cacao
Thecc1EG037112 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 1781334-1791333 Theobroma cacao
Thecc1EG037112 10.0kb downstream 10.0kb downstream 11975 true scaffold_9: 1769359-1781333 Theobroma cacao
Thecc1EG037112 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 1769359-1779358 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824562 5264 Brassicales-Malvales View MSA
124320232 5266 SBM View MSA
124168569 5268 Malvidae View MSA
123891923 5270 Rosid View MSA
123750744 5271 Pentapetalae View MSA
122797322 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain