Gene : Thecc1EG037111 T. cacao v1.1
Defline:  (1 of 3) PTHR11177//PTHR11177:SF208 - CHITINASE // SUBFAMILY NOT NAMED Genomic Order:  339
Name:  ? Thecc1EG037111 Secondary Identifier:  ? PAC:27429486
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6902 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037111 0.5kb upstream 0.5kb upstream 2164 true scaffold_9: 1777147-1779310 Theobroma cacao
Thecc1EG037111 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 1777147-1777646 Theobroma cacao
Thecc1EG037111 0.5kb downstream 0.5kb downstream 2164 true scaffold_9: 1777647-1779810 Theobroma cacao
Thecc1EG037111 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 1779311-1779810 Theobroma cacao
Thecc1EG037111 1.0kb upstream 1.0kb upstream 2664 true scaffold_9: 1776647-1779310 Theobroma cacao
Thecc1EG037111 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 1776647-1777646 Theobroma cacao
Thecc1EG037111 1.0kb downstream 1.0kb downstream 2664 true scaffold_9: 1777647-1780310 Theobroma cacao
Thecc1EG037111 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 1779311-1780310 Theobroma cacao
Thecc1EG037111 2.0kb upstream 2.0kb upstream 3664 true scaffold_9: 1775647-1779310 Theobroma cacao
Thecc1EG037111 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 1775647-1777646 Theobroma cacao
Thecc1EG037111 2.0kb downstream 2.0kb downstream 3664 true scaffold_9: 1777647-1781310 Theobroma cacao
Thecc1EG037111 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 1779311-1781310 Theobroma cacao
Thecc1EG037111 5.0kb upstream 5.0kb upstream 6664 true scaffold_9: 1772647-1779310 Theobroma cacao
Thecc1EG037111 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 1772647-1777646 Theobroma cacao
Thecc1EG037111 5.0kb downstream 5.0kb downstream 6664 true scaffold_9: 1777647-1784310 Theobroma cacao
Thecc1EG037111 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 1779311-1784310 Theobroma cacao
Thecc1EG037111 10.0kb upstream 10.0kb upstream 11664 true scaffold_9: 1767647-1779310 Theobroma cacao
Thecc1EG037111 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 1767647-1777646 Theobroma cacao
Thecc1EG037111 10.0kb downstream 10.0kb downstream 11664 true scaffold_9: 1777647-1789310 Theobroma cacao
Thecc1EG037111 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 1779311-1789310 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826161 5264 Brassicales-Malvales View MSA
124351524 5266 SBM View MSA
124248692 5268 Malvidae View MSA
124073719 5270 Rosid View MSA
123750744 5271 Pentapetalae View MSA
122797322 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain