Gene : Thecc1EG037098 T. cacao v1.1
Defline:  (1 of 2) PTHR26402//PTHR26402:SF558 - RESPONSE REGULATOR OF TWO-COMPONENT SYSTEM // TWO-COMPONENT RESPONSE REGULATOR ARR18 Genomic Order:  328
Name:  ? Thecc1EG037098 Secondary Identifier:  ? PAC:27426721
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037098 0.5kb upstream 0.5kb upstream 5250 true scaffold_9: 1715890-1721139 Theobroma cacao
Thecc1EG037098 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 1720640-1721139 Theobroma cacao
Thecc1EG037098 0.5kb downstream 0.5kb downstream 5250 true scaffold_9: 1715390-1720639 Theobroma cacao
Thecc1EG037098 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 1715390-1715889 Theobroma cacao
Thecc1EG037098 1.0kb upstream 1.0kb upstream 5750 true scaffold_9: 1715890-1721639 Theobroma cacao
Thecc1EG037098 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 1720640-1721639 Theobroma cacao
Thecc1EG037098 1.0kb downstream 1.0kb downstream 5750 true scaffold_9: 1714890-1720639 Theobroma cacao
Thecc1EG037098 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 1714890-1715889 Theobroma cacao
Thecc1EG037098 2.0kb upstream 2.0kb upstream 6750 true scaffold_9: 1715890-1722639 Theobroma cacao
Thecc1EG037098 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 1720640-1722639 Theobroma cacao
Thecc1EG037098 2.0kb downstream 2.0kb downstream 6750 true scaffold_9: 1713890-1720639 Theobroma cacao
Thecc1EG037098 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 1713890-1715889 Theobroma cacao
Thecc1EG037098 5.0kb upstream 5.0kb upstream 9750 true scaffold_9: 1715890-1725639 Theobroma cacao
Thecc1EG037098 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 1720640-1725639 Theobroma cacao
Thecc1EG037098 5.0kb downstream 5.0kb downstream 9750 true scaffold_9: 1710890-1720639 Theobroma cacao
Thecc1EG037098 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 1710890-1715889 Theobroma cacao
Thecc1EG037098 10.0kb upstream 10.0kb upstream 14750 true scaffold_9: 1715890-1730639 Theobroma cacao
Thecc1EG037098 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 1720640-1730639 Theobroma cacao
Thecc1EG037098 10.0kb downstream 10.0kb downstream 14750 true scaffold_9: 1705890-1720639 Theobroma cacao
Thecc1EG037098 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 1705890-1715889 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841325 5264 Brassicales-Malvales View MSA
124337488 5266 SBM View MSA
124238819 5268 Malvidae View MSA
124066556 5270 Rosid View MSA
123743019 5271 Pentapetalae View MSA
122794992 5272 Eudicot View MSA
122046699 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121351259 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain