Gene : Thecc1EG037076 T. cacao v1.1

Defline:  (1 of 1) K18179 - cytochrome c oxidase assembly factor 6 (COA6) Genomic Order:  309
Name:  ? Thecc1EG037076 Secondary Identifier:  ? PAC:27428752

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037076 0.5kb upstream 0.5kb upstream 3090 true scaffold_9: 1633592-1636681 Theobroma cacao
Thecc1EG037076 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 1633592-1634091 Theobroma cacao
Thecc1EG037076 0.5kb downstream 0.5kb downstream 3090 true scaffold_9: 1634092-1637181 Theobroma cacao
Thecc1EG037076 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 1636682-1637181 Theobroma cacao
Thecc1EG037076 1.0kb upstream 1.0kb upstream 3590 true scaffold_9: 1633092-1636681 Theobroma cacao
Thecc1EG037076 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 1633092-1634091 Theobroma cacao
Thecc1EG037076 1.0kb downstream 1.0kb downstream 3590 true scaffold_9: 1634092-1637681 Theobroma cacao
Thecc1EG037076 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 1636682-1637681 Theobroma cacao
Thecc1EG037076 2.0kb upstream 2.0kb upstream 4590 true scaffold_9: 1632092-1636681 Theobroma cacao
Thecc1EG037076 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 1632092-1634091 Theobroma cacao
Thecc1EG037076 2.0kb downstream 2.0kb downstream 4590 true scaffold_9: 1634092-1638681 Theobroma cacao
Thecc1EG037076 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 1636682-1638681 Theobroma cacao
Thecc1EG037076 5.0kb upstream 5.0kb upstream 7590 true scaffold_9: 1629092-1636681 Theobroma cacao
Thecc1EG037076 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 1629092-1634091 Theobroma cacao
Thecc1EG037076 5.0kb downstream 5.0kb downstream 7590 true scaffold_9: 1634092-1641681 Theobroma cacao
Thecc1EG037076 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 1636682-1641681 Theobroma cacao
Thecc1EG037076 10.0kb upstream 10.0kb upstream 12590 true scaffold_9: 1624092-1636681 Theobroma cacao
Thecc1EG037076 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 1624092-1634091 Theobroma cacao
Thecc1EG037076 10.0kb downstream 10.0kb downstream 12590 true scaffold_9: 1634092-1646681 Theobroma cacao
Thecc1EG037076 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 1636682-1646681 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831747 5264 Brassicales-Malvales View MSA
124336525 5266 SBM View MSA
124239155 5268 Malvidae View MSA
124064279 5270 Rosid View MSA
123737563 5271 Pentapetalae View MSA
122793935 5272 Eudicot View MSA
122042745 5273 Angiosperm View MSA
121350001 5274 Embryophyte View MSA
123426527 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain