Gene : Thecc1EG037085 T. cacao v1.1
Defline:  (1 of 1) PTHR20902//PTHR20902:SF0 - 41-2 PROTEIN ANTIGEN-RELATED // TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 5 Genomic Order:  316
Name:  ? Thecc1EG037085 Secondary Identifier:  ? PAC:27428853
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037085 0.5kb upstream 0.5kb upstream 4365 true scaffold_9: 1665597-1669961 Theobroma cacao
Thecc1EG037085 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 1669462-1669961 Theobroma cacao
Thecc1EG037085 0.5kb downstream 0.5kb downstream 4365 true scaffold_9: 1665097-1669461 Theobroma cacao
Thecc1EG037085 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 1665097-1665596 Theobroma cacao
Thecc1EG037085 1.0kb upstream 1.0kb upstream 4865 true scaffold_9: 1665597-1670461 Theobroma cacao
Thecc1EG037085 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 1669462-1670461 Theobroma cacao
Thecc1EG037085 1.0kb downstream 1.0kb downstream 4865 true scaffold_9: 1664597-1669461 Theobroma cacao
Thecc1EG037085 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 1664597-1665596 Theobroma cacao
Thecc1EG037085 2.0kb upstream 2.0kb upstream 5865 true scaffold_9: 1665597-1671461 Theobroma cacao
Thecc1EG037085 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 1669462-1671461 Theobroma cacao
Thecc1EG037085 2.0kb downstream 2.0kb downstream 5865 true scaffold_9: 1663597-1669461 Theobroma cacao
Thecc1EG037085 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 1663597-1665596 Theobroma cacao
Thecc1EG037085 5.0kb upstream 5.0kb upstream 8865 true scaffold_9: 1665597-1674461 Theobroma cacao
Thecc1EG037085 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 1669462-1674461 Theobroma cacao
Thecc1EG037085 5.0kb downstream 5.0kb downstream 8865 true scaffold_9: 1660597-1669461 Theobroma cacao
Thecc1EG037085 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 1660597-1665596 Theobroma cacao
Thecc1EG037085 10.0kb upstream 10.0kb upstream 13865 true scaffold_9: 1665597-1679461 Theobroma cacao
Thecc1EG037085 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 1669462-1679461 Theobroma cacao
Thecc1EG037085 10.0kb downstream 10.0kb downstream 13865 true scaffold_9: 1655597-1669461 Theobroma cacao
Thecc1EG037085 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 1655597-1665596 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835113 5264 Brassicales-Malvales View MSA
124338888 5266 SBM View MSA
124241541 5268 Malvidae View MSA
124065767 5270 Rosid View MSA
123745459 5271 Pentapetalae View MSA
122785825 5272 Eudicot View MSA
122045467 5273 Angiosperm View MSA
121344565 5274 Embryophyte View MSA
123425941 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain