Gene : Thecc1EG037066 T. cacao v1.1
Defline:  (1 of 1) K10255 - omega-6 fatty acid desaturase (delta-12 desaturase) (FAD6, desA) Genomic Order:  302
Name:  ? Thecc1EG037066 Secondary Identifier:  ? PAC:27428574
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5995 Theobroma cacao pathologic  
Tcacao PWY-762 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037066 0.5kb upstream 0.5kb upstream 6150 true scaffold_9: 1575628-1581777 Theobroma cacao
Thecc1EG037066 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 1581278-1581777 Theobroma cacao
Thecc1EG037066 0.5kb downstream 0.5kb downstream 6150 true scaffold_9: 1575128-1581277 Theobroma cacao
Thecc1EG037066 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 1575128-1575627 Theobroma cacao
Thecc1EG037066 1.0kb upstream 1.0kb upstream 6650 true scaffold_9: 1575628-1582277 Theobroma cacao
Thecc1EG037066 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 1581278-1582277 Theobroma cacao
Thecc1EG037066 1.0kb downstream 1.0kb downstream 6650 true scaffold_9: 1574628-1581277 Theobroma cacao
Thecc1EG037066 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 1574628-1575627 Theobroma cacao
Thecc1EG037066 2.0kb upstream 2.0kb upstream 7650 true scaffold_9: 1575628-1583277 Theobroma cacao
Thecc1EG037066 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 1581278-1583277 Theobroma cacao
Thecc1EG037066 2.0kb downstream 2.0kb downstream 7650 true scaffold_9: 1573628-1581277 Theobroma cacao
Thecc1EG037066 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 1573628-1575627 Theobroma cacao
Thecc1EG037066 5.0kb upstream 5.0kb upstream 10650 true scaffold_9: 1575628-1586277 Theobroma cacao
Thecc1EG037066 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 1581278-1586277 Theobroma cacao
Thecc1EG037066 5.0kb downstream 5.0kb downstream 10650 true scaffold_9: 1570628-1581277 Theobroma cacao
Thecc1EG037066 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 1570628-1575627 Theobroma cacao
Thecc1EG037066 10.0kb upstream 10.0kb upstream 15650 true scaffold_9: 1575628-1591277 Theobroma cacao
Thecc1EG037066 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 1581278-1591277 Theobroma cacao
Thecc1EG037066 10.0kb downstream 10.0kb downstream 15650 true scaffold_9: 1565628-1581277 Theobroma cacao
Thecc1EG037066 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 1565628-1575627 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041454 5273 Angiosperm View MSA
123839536 5264 Brassicales-Malvales View MSA
124338644 5266 SBM View MSA
124240606 5268 Malvidae View MSA
124062446 5270 Rosid View MSA
123738012 5271 Pentapetalae View MSA
122787271 5272 Eudicot View MSA
121345501 5274 Embryophyte View MSA
123423794 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain