Gene : Thecc1EG037022 T. cacao v1.1

Defline:  (1 of 3) PTHR22595//PTHR22595:SF56 - CHITINASE-RELATED // SUBFAMILY NOT NAMED Genomic Order:  261
Name:  ? Thecc1EG037022 Secondary Identifier:  ? PAC:27426297

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037022 0.5kb upstream 0.5kb upstream 1600 true scaffold_9: 1403652-1405251 Theobroma cacao
Thecc1EG037022 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 1404752-1405251 Theobroma cacao
Thecc1EG037022 0.5kb downstream 0.5kb downstream 1600 true scaffold_9: 1403152-1404751 Theobroma cacao
Thecc1EG037022 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 1403152-1403651 Theobroma cacao
Thecc1EG037022 1.0kb upstream 1.0kb upstream 2100 true scaffold_9: 1403652-1405751 Theobroma cacao
Thecc1EG037022 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 1404752-1405751 Theobroma cacao
Thecc1EG037022 1.0kb downstream 1.0kb downstream 2100 true scaffold_9: 1402652-1404751 Theobroma cacao
Thecc1EG037022 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 1402652-1403651 Theobroma cacao
Thecc1EG037022 2.0kb upstream 2.0kb upstream 3100 true scaffold_9: 1403652-1406751 Theobroma cacao
Thecc1EG037022 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 1404752-1406751 Theobroma cacao
Thecc1EG037022 2.0kb downstream 2.0kb downstream 3100 true scaffold_9: 1401652-1404751 Theobroma cacao
Thecc1EG037022 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 1401652-1403651 Theobroma cacao
Thecc1EG037022 5.0kb upstream 5.0kb upstream 6100 true scaffold_9: 1403652-1409751 Theobroma cacao
Thecc1EG037022 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 1404752-1409751 Theobroma cacao
Thecc1EG037022 5.0kb downstream 5.0kb downstream 6100 true scaffold_9: 1398652-1404751 Theobroma cacao
Thecc1EG037022 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 1398652-1403651 Theobroma cacao
Thecc1EG037022 10.0kb upstream 10.0kb upstream 11100 true scaffold_9: 1403652-1414751 Theobroma cacao
Thecc1EG037022 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 1404752-1414751 Theobroma cacao
Thecc1EG037022 10.0kb downstream 10.0kb downstream 11100 true scaffold_9: 1393652-1404751 Theobroma cacao
Thecc1EG037022 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 1393652-1403651 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826032 5264 Brassicales-Malvales View MSA
124320866 5266 SBM View MSA
124248907 5268 Malvidae View MSA
124072622 5270 Rosid View MSA
123752466 5271 Pentapetalae View MSA
122795564 5272 Eudicot View MSA
122051117 5273 Angiosperm View MSA
121350536 5274 Embryophyte View MSA
123381778 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain