Gene : Thecc1EG037284 T. cacao v1.1
Defline:  (1 of 1) 1.4.4.2 - Glycine dehydrogenase (aminomethyl-transferring) / Glycine-cleavage complex P-protein Genomic Order:  507
Name:  ? Thecc1EG037284 Secondary Identifier:  ? PAC:27430198
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao GLYCINE-SYN2-PWY Theobroma cacao pathologic  
Tcacao GLYCLEAV-PWY Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037284 0.5kb upstream 0.5kb upstream 7433 true scaffold_9: 2726869-2734301 Theobroma cacao
Thecc1EG037284 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 2733802-2734301 Theobroma cacao
Thecc1EG037284 0.5kb downstream 0.5kb downstream 7433 true scaffold_9: 2726369-2733801 Theobroma cacao
Thecc1EG037284 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 2726369-2726868 Theobroma cacao
Thecc1EG037284 1.0kb upstream 1.0kb upstream 7933 true scaffold_9: 2726869-2734801 Theobroma cacao
Thecc1EG037284 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 2733802-2734801 Theobroma cacao
Thecc1EG037284 1.0kb downstream 1.0kb downstream 7933 true scaffold_9: 2725869-2733801 Theobroma cacao
Thecc1EG037284 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 2725869-2726868 Theobroma cacao
Thecc1EG037284 2.0kb upstream 2.0kb upstream 8933 true scaffold_9: 2726869-2735801 Theobroma cacao
Thecc1EG037284 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 2733802-2735801 Theobroma cacao
Thecc1EG037284 2.0kb downstream 2.0kb downstream 8933 true scaffold_9: 2724869-2733801 Theobroma cacao
Thecc1EG037284 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 2724869-2726868 Theobroma cacao
Thecc1EG037284 5.0kb upstream 5.0kb upstream 11933 true scaffold_9: 2726869-2738801 Theobroma cacao
Thecc1EG037284 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 2733802-2738801 Theobroma cacao
Thecc1EG037284 5.0kb downstream 5.0kb downstream 11933 true scaffold_9: 2721869-2733801 Theobroma cacao
Thecc1EG037284 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 2721869-2726868 Theobroma cacao
Thecc1EG037284 10.0kb upstream 10.0kb upstream 16933 true scaffold_9: 2726869-2743801 Theobroma cacao
Thecc1EG037284 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 2733802-2743801 Theobroma cacao
Thecc1EG037284 10.0kb downstream 10.0kb downstream 16933 true scaffold_9: 2716869-2733801 Theobroma cacao
Thecc1EG037284 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 2716869-2726868 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828979 5264 Brassicales-Malvales View MSA
124346734 5266 SBM View MSA
124253029 5268 Malvidae View MSA
124061980 5270 Rosid View MSA
123750406 5271 Pentapetalae View MSA
122792925 5272 Eudicot View MSA
122042189 5273 Angiosperm View MSA
121346378 5274 Embryophyte View MSA
123424003 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain