Gene : Thecc1EG037252 T. cacao v1.1

Defline:  (1 of 2) PTHR31042:SF24 - CORE-2/I-BRANCHING BETA-1,6-N-ACETYLGLUCOSAMINYLTRANSFERASE FAMILY PROTEIN Genomic Order:  476
Name:  ? Thecc1EG037252 Secondary Identifier:  ? PAC:27431003

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037252 0.5kb upstream 0.5kb upstream 3728 true scaffold_9: 2558794-2562521 Theobroma cacao
Thecc1EG037252 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 2558794-2559293 Theobroma cacao
Thecc1EG037252 0.5kb downstream 0.5kb downstream 3728 true scaffold_9: 2559294-2563021 Theobroma cacao
Thecc1EG037252 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 2562522-2563021 Theobroma cacao
Thecc1EG037252 1.0kb upstream 1.0kb upstream 4228 true scaffold_9: 2558294-2562521 Theobroma cacao
Thecc1EG037252 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 2558294-2559293 Theobroma cacao
Thecc1EG037252 1.0kb downstream 1.0kb downstream 4228 true scaffold_9: 2559294-2563521 Theobroma cacao
Thecc1EG037252 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 2562522-2563521 Theobroma cacao
Thecc1EG037252 2.0kb upstream 2.0kb upstream 5228 true scaffold_9: 2557294-2562521 Theobroma cacao
Thecc1EG037252 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 2557294-2559293 Theobroma cacao
Thecc1EG037252 2.0kb downstream 2.0kb downstream 5228 true scaffold_9: 2559294-2564521 Theobroma cacao
Thecc1EG037252 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 2562522-2564521 Theobroma cacao
Thecc1EG037252 5.0kb upstream 5.0kb upstream 8228 true scaffold_9: 2554294-2562521 Theobroma cacao
Thecc1EG037252 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 2554294-2559293 Theobroma cacao
Thecc1EG037252 5.0kb downstream 5.0kb downstream 8228 true scaffold_9: 2559294-2567521 Theobroma cacao
Thecc1EG037252 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 2562522-2567521 Theobroma cacao
Thecc1EG037252 10.0kb upstream 10.0kb upstream 13228 true scaffold_9: 2549294-2562521 Theobroma cacao
Thecc1EG037252 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 2549294-2559293 Theobroma cacao
Thecc1EG037252 10.0kb downstream 10.0kb downstream 13228 true scaffold_9: 2559294-2572521 Theobroma cacao
Thecc1EG037252 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 2562522-2572521 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041085 5273 Angiosperm View MSA
123838827 5264 Brassicales-Malvales View MSA
124342638 5266 SBM View MSA
124253305 5268 Malvidae View MSA
124070934 5270 Rosid View MSA
123745027 5271 Pentapetalae View MSA
122787278 5272 Eudicot View MSA
121351490 5274 Embryophyte View MSA
123428085 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain