Gene : Thecc1EG037205 T. cacao v1.1

Defline:  (1 of 1) PTHR10071//PTHR10071:SF196 - TRANSCRIPTION FACTOR GATA GATA BINDING FACTOR // SUBFAMILY NOT NAMED Genomic Order:  432
Name:  ? Thecc1EG037205 Secondary Identifier:  ? PAC:27430169

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037205 0.5kb upstream 0.5kb upstream 2585 true scaffold_9: 2311491-2314075 Theobroma cacao
Thecc1EG037205 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 2313576-2314075 Theobroma cacao
Thecc1EG037205 0.5kb downstream 0.5kb downstream 2585 true scaffold_9: 2310991-2313575 Theobroma cacao
Thecc1EG037205 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 2310991-2311490 Theobroma cacao
Thecc1EG037205 1.0kb upstream 1.0kb upstream 3085 true scaffold_9: 2311491-2314575 Theobroma cacao
Thecc1EG037205 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 2313576-2314575 Theobroma cacao
Thecc1EG037205 1.0kb downstream 1.0kb downstream 3085 true scaffold_9: 2310491-2313575 Theobroma cacao
Thecc1EG037205 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 2310491-2311490 Theobroma cacao
Thecc1EG037205 2.0kb upstream 2.0kb upstream 4085 true scaffold_9: 2311491-2315575 Theobroma cacao
Thecc1EG037205 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 2313576-2315575 Theobroma cacao
Thecc1EG037205 2.0kb downstream 2.0kb downstream 4085 true scaffold_9: 2309491-2313575 Theobroma cacao
Thecc1EG037205 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 2309491-2311490 Theobroma cacao
Thecc1EG037205 5.0kb upstream 5.0kb upstream 7085 true scaffold_9: 2311491-2318575 Theobroma cacao
Thecc1EG037205 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 2313576-2318575 Theobroma cacao
Thecc1EG037205 5.0kb downstream 5.0kb downstream 7085 true scaffold_9: 2306491-2313575 Theobroma cacao
Thecc1EG037205 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 2306491-2311490 Theobroma cacao
Thecc1EG037205 10.0kb upstream 10.0kb upstream 12085 true scaffold_9: 2311491-2323575 Theobroma cacao
Thecc1EG037205 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 2313576-2323575 Theobroma cacao
Thecc1EG037205 10.0kb downstream 10.0kb downstream 12085 true scaffold_9: 2301491-2313575 Theobroma cacao
Thecc1EG037205 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 2301491-2311490 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835655 5264 Brassicales-Malvales View MSA
124344223 5266 SBM View MSA
124253623 5268 Malvidae View MSA
124070320 5270 Rosid View MSA
123751273 5271 Pentapetalae View MSA
122797583 5272 Eudicot View MSA
122049564 5273 Angiosperm View MSA
121349341 5274 Embryophyte View MSA
123428177 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain