Gene : Thecc1EG037192 T. cacao v1.1
Defline:  (1 of 1) PTHR11062//PTHR11062:SF87 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // SUBFAMILY NOT NAMED Genomic Order:  420
Name:  ? Thecc1EG037192 Secondary Identifier:  ? PAC:27425951
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5980 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037192 0.5kb upstream 0.5kb upstream 982 true scaffold_9: 2232701-2233682 Theobroma cacao
Thecc1EG037192 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 2232701-2233200 Theobroma cacao
Thecc1EG037192 0.5kb downstream 0.5kb downstream 982 true scaffold_9: 2233201-2234182 Theobroma cacao
Thecc1EG037192 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 2233683-2234182 Theobroma cacao
Thecc1EG037192 1.0kb upstream 1.0kb upstream 1482 true scaffold_9: 2232201-2233682 Theobroma cacao
Thecc1EG037192 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 2232201-2233200 Theobroma cacao
Thecc1EG037192 1.0kb downstream 1.0kb downstream 1482 true scaffold_9: 2233201-2234682 Theobroma cacao
Thecc1EG037192 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 2233683-2234682 Theobroma cacao
Thecc1EG037192 2.0kb upstream 2.0kb upstream 2482 true scaffold_9: 2231201-2233682 Theobroma cacao
Thecc1EG037192 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 2231201-2233200 Theobroma cacao
Thecc1EG037192 2.0kb downstream 2.0kb downstream 2482 true scaffold_9: 2233201-2235682 Theobroma cacao
Thecc1EG037192 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 2233683-2235682 Theobroma cacao
Thecc1EG037192 5.0kb upstream 5.0kb upstream 5482 true scaffold_9: 2228201-2233682 Theobroma cacao
Thecc1EG037192 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 2228201-2233200 Theobroma cacao
Thecc1EG037192 5.0kb downstream 5.0kb downstream 5482 true scaffold_9: 2233201-2238682 Theobroma cacao
Thecc1EG037192 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 2233683-2238682 Theobroma cacao
Thecc1EG037192 10.0kb upstream 10.0kb upstream 10482 true scaffold_9: 2223201-2233682 Theobroma cacao
Thecc1EG037192 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 2223201-2233200 Theobroma cacao
Thecc1EG037192 10.0kb downstream 10.0kb downstream 10482 true scaffold_9: 2233201-2243682 Theobroma cacao
Thecc1EG037192 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 2233683-2243682 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823401 5264 Brassicales-Malvales Singleton cluster - no MSA
124319486 5266 SBM Singleton cluster - no MSA
124249624 5268 Malvidae View MSA
124051087 5270 Rosid View MSA
123751032 5271 Pentapetalae View MSA
122797278 5272 Eudicot View MSA
122050562 5273 Angiosperm View MSA
121350610 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain