Gene : Thecc1EG037195 T. cacao v1.1
Defline:  (1 of 1) 1.13.11.69//1.13.11.70 - Carlactone synthase // All-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase / Carotenoid cleavage dioxygenase 8 Genomic Order:  423
Name:  ? Thecc1EG037195 Secondary Identifier:  ? PAC:27425700
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7101 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037195 0.5kb upstream 0.5kb upstream 4180 true scaffold_9: 2271958-2276137 Theobroma cacao
Thecc1EG037195 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 2271958-2272457 Theobroma cacao
Thecc1EG037195 0.5kb downstream 0.5kb downstream 4180 true scaffold_9: 2272458-2276637 Theobroma cacao
Thecc1EG037195 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 2276138-2276637 Theobroma cacao
Thecc1EG037195 1.0kb upstream 1.0kb upstream 4680 true scaffold_9: 2271458-2276137 Theobroma cacao
Thecc1EG037195 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 2271458-2272457 Theobroma cacao
Thecc1EG037195 1.0kb downstream 1.0kb downstream 4680 true scaffold_9: 2272458-2277137 Theobroma cacao
Thecc1EG037195 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 2276138-2277137 Theobroma cacao
Thecc1EG037195 2.0kb upstream 2.0kb upstream 5680 true scaffold_9: 2270458-2276137 Theobroma cacao
Thecc1EG037195 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 2270458-2272457 Theobroma cacao
Thecc1EG037195 2.0kb downstream 2.0kb downstream 5680 true scaffold_9: 2272458-2278137 Theobroma cacao
Thecc1EG037195 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 2276138-2278137 Theobroma cacao
Thecc1EG037195 5.0kb upstream 5.0kb upstream 8680 true scaffold_9: 2267458-2276137 Theobroma cacao
Thecc1EG037195 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 2267458-2272457 Theobroma cacao
Thecc1EG037195 5.0kb downstream 5.0kb downstream 8680 true scaffold_9: 2272458-2281137 Theobroma cacao
Thecc1EG037195 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 2276138-2281137 Theobroma cacao
Thecc1EG037195 10.0kb upstream 10.0kb upstream 13680 true scaffold_9: 2262458-2276137 Theobroma cacao
Thecc1EG037195 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 2262458-2272457 Theobroma cacao
Thecc1EG037195 10.0kb downstream 10.0kb downstream 13680 true scaffold_9: 2272458-2286137 Theobroma cacao
Thecc1EG037195 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 2276138-2286137 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123840885 5264 Brassicales-Malvales View MSA
124343885 5266 SBM View MSA
124238264 5268 Malvidae View MSA
124065320 5270 Rosid View MSA
123738795 5271 Pentapetalae View MSA
122791259 5272 Eudicot View MSA
122048984 5273 Angiosperm View MSA
123428919 5275 Viridiplantae View MSA
121344649 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain