Gene : Thecc1EG037184 T. cacao v1.1
Defline:  (1 of 3) PTHR10543//PTHR10543:SF30 - BETA-CAROTENE DIOXYGENASE // SUBFAMILY NOT NAMED Genomic Order:  413
Name:  ? Thecc1EG037184 Secondary Identifier:  ? PAC:27428129
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-695 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037184 0.5kb upstream 0.5kb upstream 5092 true scaffold_9: 2195482-2200573 Theobroma cacao
Thecc1EG037184 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 2200074-2200573 Theobroma cacao
Thecc1EG037184 0.5kb downstream 0.5kb downstream 5092 true scaffold_9: 2194982-2200073 Theobroma cacao
Thecc1EG037184 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 2194982-2195481 Theobroma cacao
Thecc1EG037184 1.0kb upstream 1.0kb upstream 5592 true scaffold_9: 2195482-2201073 Theobroma cacao
Thecc1EG037184 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 2200074-2201073 Theobroma cacao
Thecc1EG037184 1.0kb downstream 1.0kb downstream 5592 true scaffold_9: 2194482-2200073 Theobroma cacao
Thecc1EG037184 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 2194482-2195481 Theobroma cacao
Thecc1EG037184 2.0kb upstream 2.0kb upstream 6592 true scaffold_9: 2195482-2202073 Theobroma cacao
Thecc1EG037184 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 2200074-2202073 Theobroma cacao
Thecc1EG037184 2.0kb downstream 2.0kb downstream 6592 true scaffold_9: 2193482-2200073 Theobroma cacao
Thecc1EG037184 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 2193482-2195481 Theobroma cacao
Thecc1EG037184 5.0kb upstream 5.0kb upstream 9592 true scaffold_9: 2195482-2205073 Theobroma cacao
Thecc1EG037184 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 2200074-2205073 Theobroma cacao
Thecc1EG037184 5.0kb downstream 5.0kb downstream 9592 true scaffold_9: 2190482-2200073 Theobroma cacao
Thecc1EG037184 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 2190482-2195481 Theobroma cacao
Thecc1EG037184 10.0kb upstream 10.0kb upstream 14592 true scaffold_9: 2195482-2210073 Theobroma cacao
Thecc1EG037184 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 2200074-2210073 Theobroma cacao
Thecc1EG037184 10.0kb downstream 10.0kb downstream 14592 true scaffold_9: 2185482-2200073 Theobroma cacao
Thecc1EG037184 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 2185482-2195481 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824759 5264 Brassicales-Malvales View MSA
124347076 5266 SBM View MSA
124246521 5268 Malvidae View MSA
124074147 5270 Rosid View MSA
123748697 5271 Pentapetalae View MSA
122795171 5272 Eudicot View MSA
122051607 5273 Angiosperm View MSA
121349725 5274 Embryophyte View MSA
123381417 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain