Gene : Thecc1EG037186 T. cacao v1.1
Defline:  (1 of 3) K11159 - carotenoid cleavage dioxygenase (K11159) Genomic Order:  415
Name:  ? Thecc1EG037186 Secondary Identifier:  ? PAC:27426688
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-695 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037186 0.5kb upstream 0.5kb upstream 3180 true scaffold_9: 2212274-2215453 Theobroma cacao
Thecc1EG037186 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 2214954-2215453 Theobroma cacao
Thecc1EG037186 0.5kb downstream 0.5kb downstream 3180 true scaffold_9: 2211774-2214953 Theobroma cacao
Thecc1EG037186 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 2211774-2212273 Theobroma cacao
Thecc1EG037186 1.0kb upstream 1.0kb upstream 3680 true scaffold_9: 2212274-2215953 Theobroma cacao
Thecc1EG037186 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 2214954-2215953 Theobroma cacao
Thecc1EG037186 1.0kb downstream 1.0kb downstream 3680 true scaffold_9: 2211274-2214953 Theobroma cacao
Thecc1EG037186 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 2211274-2212273 Theobroma cacao
Thecc1EG037186 2.0kb upstream 2.0kb upstream 4680 true scaffold_9: 2212274-2216953 Theobroma cacao
Thecc1EG037186 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 2214954-2216953 Theobroma cacao
Thecc1EG037186 2.0kb downstream 2.0kb downstream 4680 true scaffold_9: 2210274-2214953 Theobroma cacao
Thecc1EG037186 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 2210274-2212273 Theobroma cacao
Thecc1EG037186 5.0kb upstream 5.0kb upstream 7680 true scaffold_9: 2212274-2219953 Theobroma cacao
Thecc1EG037186 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 2214954-2219953 Theobroma cacao
Thecc1EG037186 5.0kb downstream 5.0kb downstream 7680 true scaffold_9: 2207274-2214953 Theobroma cacao
Thecc1EG037186 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 2207274-2212273 Theobroma cacao
Thecc1EG037186 10.0kb upstream 10.0kb upstream 12680 true scaffold_9: 2212274-2224953 Theobroma cacao
Thecc1EG037186 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 2214954-2224953 Theobroma cacao
Thecc1EG037186 10.0kb downstream 10.0kb downstream 12680 true scaffold_9: 2202274-2214953 Theobroma cacao
Thecc1EG037186 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 2202274-2212273 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823270 5264 Brassicales-Malvales Singleton cluster - no MSA
124319360 5266 SBM Singleton cluster - no MSA
124255379 5268 Malvidae View MSA
124041072 5270 Rosid View MSA
123748697 5271 Pentapetalae View MSA
122795171 5272 Eudicot View MSA
122051607 5273 Angiosperm View MSA
121349725 5274 Embryophyte View MSA
123381417 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain