Gene : Thecc1EG037435 T. cacao v1.1

Defline:  (1 of 10) PF04784//PF14389 - Protein of unknown function, DUF547 (DUF547) // Leucine-zipper of ternary complex factor MIP1 (Lzipper-MIP1) Genomic Order:  641
Name:  ? Thecc1EG037435 Secondary Identifier:  ? PAC:27430981

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037435 0.5kb upstream 0.5kb upstream 7686 true scaffold_9: 3428426-3436111 Theobroma cacao
Thecc1EG037435 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 3435612-3436111 Theobroma cacao
Thecc1EG037435 0.5kb downstream 0.5kb downstream 7686 true scaffold_9: 3427926-3435611 Theobroma cacao
Thecc1EG037435 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 3427926-3428425 Theobroma cacao
Thecc1EG037435 1.0kb upstream 1.0kb upstream 8186 true scaffold_9: 3428426-3436611 Theobroma cacao
Thecc1EG037435 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 3435612-3436611 Theobroma cacao
Thecc1EG037435 1.0kb downstream 1.0kb downstream 8186 true scaffold_9: 3427426-3435611 Theobroma cacao
Thecc1EG037435 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 3427426-3428425 Theobroma cacao
Thecc1EG037435 2.0kb upstream 2.0kb upstream 9186 true scaffold_9: 3428426-3437611 Theobroma cacao
Thecc1EG037435 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 3435612-3437611 Theobroma cacao
Thecc1EG037435 2.0kb downstream 2.0kb downstream 9186 true scaffold_9: 3426426-3435611 Theobroma cacao
Thecc1EG037435 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 3426426-3428425 Theobroma cacao
Thecc1EG037435 5.0kb upstream 5.0kb upstream 12186 true scaffold_9: 3428426-3440611 Theobroma cacao
Thecc1EG037435 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 3435612-3440611 Theobroma cacao
Thecc1EG037435 5.0kb downstream 5.0kb downstream 12186 true scaffold_9: 3423426-3435611 Theobroma cacao
Thecc1EG037435 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 3423426-3428425 Theobroma cacao
Thecc1EG037435 10.0kb upstream 10.0kb upstream 17186 true scaffold_9: 3428426-3445611 Theobroma cacao
Thecc1EG037435 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 3435612-3445611 Theobroma cacao
Thecc1EG037435 10.0kb downstream 10.0kb downstream 17186 true scaffold_9: 3418426-3435611 Theobroma cacao
Thecc1EG037435 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 3418426-3428425 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826390 5264 Brassicales-Malvales View MSA
124321020 5266 SBM View MSA
124248467 5268 Malvidae View MSA
124071956 5270 Rosid View MSA
123741480 5271 Pentapetalae View MSA
122796388 5272 Eudicot View MSA
122050370 5273 Angiosperm View MSA
121350596 5274 Embryophyte View MSA
123381815 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain