Gene : Thecc1EG037441 T. cacao v1.1
Defline:  (1 of 2) PTHR31707//PTHR31707:SF55 - FAMILY NOT NAMED // PECTINESTERASE 2-RELATED Genomic Order:  647
Name:  ? Thecc1EG037441 Secondary Identifier:  ? PAC:27428976
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-1081 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037441 0.5kb upstream 0.5kb upstream 4003 true scaffold_9: 3465241-3469243 Theobroma cacao
Thecc1EG037441 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 3465241-3465740 Theobroma cacao
Thecc1EG037441 0.5kb downstream 0.5kb downstream 4003 true scaffold_9: 3465741-3469743 Theobroma cacao
Thecc1EG037441 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 3469244-3469743 Theobroma cacao
Thecc1EG037441 1.0kb upstream 1.0kb upstream 4503 true scaffold_9: 3464741-3469243 Theobroma cacao
Thecc1EG037441 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 3464741-3465740 Theobroma cacao
Thecc1EG037441 1.0kb downstream 1.0kb downstream 4503 true scaffold_9: 3465741-3470243 Theobroma cacao
Thecc1EG037441 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 3469244-3470243 Theobroma cacao
Thecc1EG037441 2.0kb upstream 2.0kb upstream 5503 true scaffold_9: 3463741-3469243 Theobroma cacao
Thecc1EG037441 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 3463741-3465740 Theobroma cacao
Thecc1EG037441 2.0kb downstream 2.0kb downstream 5503 true scaffold_9: 3465741-3471243 Theobroma cacao
Thecc1EG037441 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 3469244-3471243 Theobroma cacao
Thecc1EG037441 5.0kb upstream 5.0kb upstream 8503 true scaffold_9: 3460741-3469243 Theobroma cacao
Thecc1EG037441 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 3460741-3465740 Theobroma cacao
Thecc1EG037441 5.0kb downstream 5.0kb downstream 8503 true scaffold_9: 3465741-3474243 Theobroma cacao
Thecc1EG037441 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 3469244-3474243 Theobroma cacao
Thecc1EG037441 10.0kb upstream 10.0kb upstream 13503 true scaffold_9: 3455741-3469243 Theobroma cacao
Thecc1EG037441 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 3455741-3465740 Theobroma cacao
Thecc1EG037441 10.0kb downstream 10.0kb downstream 13503 true scaffold_9: 3465741-3479243 Theobroma cacao
Thecc1EG037441 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 3469244-3479243 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824293 5264 Brassicales-Malvales View MSA
124347712 5266 SBM View MSA
124246610 5268 Malvidae View MSA
124074194 5270 Rosid View MSA
123741705 5271 Pentapetalae View MSA
122792272 5272 Eudicot View MSA
122051530 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain