Gene : Thecc1EG037426 T. cacao v1.1
Defline:  (1 of 1) K16274 - E3 ubiquitin-protein ligase AIP2 [EC:6.3.2.19] (AIP2) Genomic Order:  633
Name:  ? Thecc1EG037426 Secondary Identifier:  ? PAC:27426341
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-7511 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037426 0.5kb upstream 0.5kb upstream 2484 true scaffold_9: 3386308-3388791 Theobroma cacao
Thecc1EG037426 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 3388292-3388791 Theobroma cacao
Thecc1EG037426 0.5kb downstream 0.5kb downstream 2484 true scaffold_9: 3385808-3388291 Theobroma cacao
Thecc1EG037426 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 3385808-3386307 Theobroma cacao
Thecc1EG037426 1.0kb upstream 1.0kb upstream 2984 true scaffold_9: 3386308-3389291 Theobroma cacao
Thecc1EG037426 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 3388292-3389291 Theobroma cacao
Thecc1EG037426 1.0kb downstream 1.0kb downstream 2984 true scaffold_9: 3385308-3388291 Theobroma cacao
Thecc1EG037426 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 3385308-3386307 Theobroma cacao
Thecc1EG037426 2.0kb upstream 2.0kb upstream 3984 true scaffold_9: 3386308-3390291 Theobroma cacao
Thecc1EG037426 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 3388292-3390291 Theobroma cacao
Thecc1EG037426 2.0kb downstream 2.0kb downstream 3984 true scaffold_9: 3384308-3388291 Theobroma cacao
Thecc1EG037426 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 3384308-3386307 Theobroma cacao
Thecc1EG037426 5.0kb upstream 5.0kb upstream 6984 true scaffold_9: 3386308-3393291 Theobroma cacao
Thecc1EG037426 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 3388292-3393291 Theobroma cacao
Thecc1EG037426 5.0kb downstream 5.0kb downstream 6984 true scaffold_9: 3381308-3388291 Theobroma cacao
Thecc1EG037426 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 3381308-3386307 Theobroma cacao
Thecc1EG037426 10.0kb upstream 10.0kb upstream 11984 true scaffold_9: 3386308-3398291 Theobroma cacao
Thecc1EG037426 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 3388292-3398291 Theobroma cacao
Thecc1EG037426 10.0kb downstream 10.0kb downstream 11984 true scaffold_9: 3376308-3388291 Theobroma cacao
Thecc1EG037426 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 3376308-3386307 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026169 5273 Angiosperm View MSA
123834702 5264 Brassicales-Malvales View MSA
124342804 5266 SBM View MSA
124243056 5268 Malvidae View MSA
124060743 5270 Rosid View MSA
123738156 5271 Pentapetalae View MSA
122787757 5272 Eudicot View MSA
123429130 5275 Viridiplantae View MSA
121350344 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain