Gene : Thecc1EG037367 T. cacao v1.1

Defline:  (1 of 1) PTHR34455//PTHR34455:SF1 - FAMILY NOT NAMED // EXPRESSED PROTEIN Genomic Order:  581
Name:  ? Thecc1EG037367 Secondary Identifier:  ? PAC:27430436

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037367 0.5kb upstream 0.5kb upstream 1547 true scaffold_9: 3064243-3065789 Theobroma cacao
Thecc1EG037367 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 3064243-3064742 Theobroma cacao
Thecc1EG037367 0.5kb downstream 0.5kb downstream 1547 true scaffold_9: 3064743-3066289 Theobroma cacao
Thecc1EG037367 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 3065790-3066289 Theobroma cacao
Thecc1EG037367 1.0kb upstream 1.0kb upstream 2047 true scaffold_9: 3063743-3065789 Theobroma cacao
Thecc1EG037367 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 3063743-3064742 Theobroma cacao
Thecc1EG037367 1.0kb downstream 1.0kb downstream 2047 true scaffold_9: 3064743-3066789 Theobroma cacao
Thecc1EG037367 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 3065790-3066789 Theobroma cacao
Thecc1EG037367 2.0kb upstream 2.0kb upstream 3047 true scaffold_9: 3062743-3065789 Theobroma cacao
Thecc1EG037367 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 3062743-3064742 Theobroma cacao
Thecc1EG037367 2.0kb downstream 2.0kb downstream 3047 true scaffold_9: 3064743-3067789 Theobroma cacao
Thecc1EG037367 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 3065790-3067789 Theobroma cacao
Thecc1EG037367 5.0kb upstream 5.0kb upstream 6047 true scaffold_9: 3059743-3065789 Theobroma cacao
Thecc1EG037367 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 3059743-3064742 Theobroma cacao
Thecc1EG037367 5.0kb downstream 5.0kb downstream 6047 true scaffold_9: 3064743-3070789 Theobroma cacao
Thecc1EG037367 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 3065790-3070789 Theobroma cacao
Thecc1EG037367 10.0kb upstream 10.0kb upstream 11047 true scaffold_9: 3054743-3065789 Theobroma cacao
Thecc1EG037367 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 3054743-3064742 Theobroma cacao
Thecc1EG037367 10.0kb downstream 10.0kb downstream 11047 true scaffold_9: 3064743-3075789 Theobroma cacao
Thecc1EG037367 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 3065790-3075789 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839864 5264 Brassicales-Malvales View MSA
124349923 5266 SBM View MSA
124245307 5268 Malvidae View MSA
124072175 5270 Rosid View MSA
123739685 5271 Pentapetalae View MSA
122793757 5272 Eudicot View MSA
122041544 5273 Angiosperm View MSA
121346235 5274 Embryophyte View MSA
123428099 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain