Gene : Thecc1EG037329 T. cacao v1.1
Defline:  (1 of 5) PF04827 - Plant transposon protein (Plant_tran) Genomic Order:  548
Name:  ? Thecc1EG037329 Secondary Identifier:  ? PAC:27429917
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037329 0.5kb upstream 0.5kb upstream 2908 true scaffold_9: 2921485-2924392 Theobroma cacao
Thecc1EG037329 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 2921485-2921984 Theobroma cacao
Thecc1EG037329 0.5kb downstream 0.5kb downstream 2908 true scaffold_9: 2921985-2924892 Theobroma cacao
Thecc1EG037329 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 2924393-2924892 Theobroma cacao
Thecc1EG037329 1.0kb upstream 1.0kb upstream 3408 true scaffold_9: 2920985-2924392 Theobroma cacao
Thecc1EG037329 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 2920985-2921984 Theobroma cacao
Thecc1EG037329 1.0kb downstream 1.0kb downstream 3408 true scaffold_9: 2921985-2925392 Theobroma cacao
Thecc1EG037329 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 2924393-2925392 Theobroma cacao
Thecc1EG037329 2.0kb upstream 2.0kb upstream 4408 true scaffold_9: 2919985-2924392 Theobroma cacao
Thecc1EG037329 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 2919985-2921984 Theobroma cacao
Thecc1EG037329 2.0kb downstream 2.0kb downstream 4408 true scaffold_9: 2921985-2926392 Theobroma cacao
Thecc1EG037329 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 2924393-2926392 Theobroma cacao
Thecc1EG037329 5.0kb upstream 5.0kb upstream 7408 true scaffold_9: 2916985-2924392 Theobroma cacao
Thecc1EG037329 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 2916985-2921984 Theobroma cacao
Thecc1EG037329 5.0kb downstream 5.0kb downstream 7408 true scaffold_9: 2921985-2929392 Theobroma cacao
Thecc1EG037329 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 2924393-2929392 Theobroma cacao
Thecc1EG037329 10.0kb upstream 10.0kb upstream 12408 true scaffold_9: 2911985-2924392 Theobroma cacao
Thecc1EG037329 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 2911985-2921984 Theobroma cacao
Thecc1EG037329 10.0kb downstream 10.0kb downstream 12408 true scaffold_9: 2921985-2934392 Theobroma cacao
Thecc1EG037329 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 2924393-2934392 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832010 5264 Brassicales-Malvales View MSA
124321766 5266 SBM View MSA
124248021 5268 Malvidae View MSA
124072686 5270 Rosid View MSA
123741393 5271 Pentapetalae View MSA
122770042 5272 Eudicot View MSA
122051358 5273 Angiosperm View MSA
121345285 5274 Embryophyte View MSA
123380187 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain