Gene : Thecc1EG037565 T. cacao v1.1
Defline:  (1 of 1) PTHR11760//PTHR11760:SF22 - 30S/40S RIBOSOMAL PROTEIN S3 // SUBFAMILY NOT NAMED Genomic Order:  762
Name:  ? Thecc1EG037565 Secondary Identifier:  ? PAC:27429114
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037565 0.5kb upstream 0.5kb upstream 2648 true scaffold_9: 4179350-4181997 Theobroma cacao
Thecc1EG037565 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 4179350-4179849 Theobroma cacao
Thecc1EG037565 0.5kb downstream 0.5kb downstream 2648 true scaffold_9: 4179850-4182497 Theobroma cacao
Thecc1EG037565 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 4181998-4182497 Theobroma cacao
Thecc1EG037565 1.0kb upstream 1.0kb upstream 3148 true scaffold_9: 4178850-4181997 Theobroma cacao
Thecc1EG037565 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 4178850-4179849 Theobroma cacao
Thecc1EG037565 1.0kb downstream 1.0kb downstream 3148 true scaffold_9: 4179850-4182997 Theobroma cacao
Thecc1EG037565 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 4181998-4182997 Theobroma cacao
Thecc1EG037565 2.0kb upstream 2.0kb upstream 4148 true scaffold_9: 4177850-4181997 Theobroma cacao
Thecc1EG037565 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 4177850-4179849 Theobroma cacao
Thecc1EG037565 2.0kb downstream 2.0kb downstream 4148 true scaffold_9: 4179850-4183997 Theobroma cacao
Thecc1EG037565 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 4181998-4183997 Theobroma cacao
Thecc1EG037565 5.0kb upstream 5.0kb upstream 7148 true scaffold_9: 4174850-4181997 Theobroma cacao
Thecc1EG037565 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 4174850-4179849 Theobroma cacao
Thecc1EG037565 5.0kb downstream 5.0kb downstream 7148 true scaffold_9: 4179850-4186997 Theobroma cacao
Thecc1EG037565 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 4181998-4186997 Theobroma cacao
Thecc1EG037565 10.0kb upstream 10.0kb upstream 12148 true scaffold_9: 4169850-4181997 Theobroma cacao
Thecc1EG037565 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 4169850-4179849 Theobroma cacao
Thecc1EG037565 10.0kb downstream 10.0kb downstream 12148 true scaffold_9: 4179850-4191997 Theobroma cacao
Thecc1EG037565 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 4181998-4191997 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824792 5264 Brassicales-Malvales View MSA
124349099 5266 SBM View MSA
124252771 5268 Malvidae View MSA
124071878 5270 Rosid View MSA
123743530 5271 Pentapetalae View MSA
122790634 5272 Eudicot View MSA
122043820 5273 Angiosperm View MSA
121347963 5274 Embryophyte View MSA
123426422 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain