Gene : Thecc1EG037517 T. cacao v1.1

Defline:  (1 of 1) PTHR32378//PTHR32378:SF9 - FAMILY NOT NAMED // KERATIN-ASSOCIATED PROTEIN 29-1 Genomic Order:  719
Name:  ? Thecc1EG037517 Secondary Identifier:  ? PAC:27426534

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037517 0.5kb upstream 0.5kb upstream 4199 true scaffold_9: 3897894-3902092 Theobroma cacao
Thecc1EG037517 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 3897894-3898393 Theobroma cacao
Thecc1EG037517 0.5kb downstream 0.5kb downstream 4199 true scaffold_9: 3898394-3902592 Theobroma cacao
Thecc1EG037517 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 3902093-3902592 Theobroma cacao
Thecc1EG037517 1.0kb upstream 1.0kb upstream 4699 true scaffold_9: 3897394-3902092 Theobroma cacao
Thecc1EG037517 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 3897394-3898393 Theobroma cacao
Thecc1EG037517 1.0kb downstream 1.0kb downstream 4699 true scaffold_9: 3898394-3903092 Theobroma cacao
Thecc1EG037517 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 3902093-3903092 Theobroma cacao
Thecc1EG037517 2.0kb upstream 2.0kb upstream 5699 true scaffold_9: 3896394-3902092 Theobroma cacao
Thecc1EG037517 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 3896394-3898393 Theobroma cacao
Thecc1EG037517 2.0kb downstream 2.0kb downstream 5699 true scaffold_9: 3898394-3904092 Theobroma cacao
Thecc1EG037517 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 3902093-3904092 Theobroma cacao
Thecc1EG037517 5.0kb upstream 5.0kb upstream 8699 true scaffold_9: 3893394-3902092 Theobroma cacao
Thecc1EG037517 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 3893394-3898393 Theobroma cacao
Thecc1EG037517 5.0kb downstream 5.0kb downstream 8699 true scaffold_9: 3898394-3907092 Theobroma cacao
Thecc1EG037517 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 3902093-3907092 Theobroma cacao
Thecc1EG037517 10.0kb upstream 10.0kb upstream 13699 true scaffold_9: 3888394-3902092 Theobroma cacao
Thecc1EG037517 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 3888394-3898393 Theobroma cacao
Thecc1EG037517 10.0kb downstream 10.0kb downstream 13699 true scaffold_9: 3898394-3912092 Theobroma cacao
Thecc1EG037517 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 3902093-3912092 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026325 5273 Angiosperm View MSA
123835114 5264 Brassicales-Malvales View MSA
124351471 5266 SBM View MSA
124252943 5268 Malvidae View MSA
124071651 5270 Rosid View MSA
123750452 5271 Pentapetalae View MSA
122787622 5272 Eudicot View MSA
121296281 5274 Embryophyte View MSA
123334475 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain