Gene : Thecc1EG037496 T. cacao v1.1
Defline:  (1 of 3) PF00295//PF12708 - Glycosyl hydrolases family 28 (Glyco_hydro_28) // Pectate lyase superfamily protein (Pectate_lyase_3) Genomic Order:  699
Name:  ? Thecc1EG037496 Secondary Identifier:  ? PAC:27427543
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037496 0.5kb upstream 0.5kb upstream 6317 true scaffold_9: 3819258-3825574 Theobroma cacao
Thecc1EG037496 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 3825075-3825574 Theobroma cacao
Thecc1EG037496 0.5kb downstream 0.5kb downstream 6317 true scaffold_9: 3818758-3825074 Theobroma cacao
Thecc1EG037496 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 3818758-3819257 Theobroma cacao
Thecc1EG037496 1.0kb upstream 1.0kb upstream 6817 true scaffold_9: 3819258-3826074 Theobroma cacao
Thecc1EG037496 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 3825075-3826074 Theobroma cacao
Thecc1EG037496 1.0kb downstream 1.0kb downstream 6817 true scaffold_9: 3818258-3825074 Theobroma cacao
Thecc1EG037496 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 3818258-3819257 Theobroma cacao
Thecc1EG037496 2.0kb upstream 2.0kb upstream 7817 true scaffold_9: 3819258-3827074 Theobroma cacao
Thecc1EG037496 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 3825075-3827074 Theobroma cacao
Thecc1EG037496 2.0kb downstream 2.0kb downstream 7817 true scaffold_9: 3817258-3825074 Theobroma cacao
Thecc1EG037496 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 3817258-3819257 Theobroma cacao
Thecc1EG037496 5.0kb upstream 5.0kb upstream 10817 true scaffold_9: 3819258-3830074 Theobroma cacao
Thecc1EG037496 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 3825075-3830074 Theobroma cacao
Thecc1EG037496 5.0kb downstream 5.0kb downstream 10817 true scaffold_9: 3814258-3825074 Theobroma cacao
Thecc1EG037496 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 3814258-3819257 Theobroma cacao
Thecc1EG037496 10.0kb upstream 10.0kb upstream 15817 true scaffold_9: 3819258-3835074 Theobroma cacao
Thecc1EG037496 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 3825075-3835074 Theobroma cacao
Thecc1EG037496 10.0kb downstream 10.0kb downstream 15817 true scaffold_9: 3809258-3825074 Theobroma cacao
Thecc1EG037496 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 3809258-3819257 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026431 5273 Angiosperm View MSA
123832337 5264 Brassicales-Malvales View MSA
124343572 5266 SBM View MSA
124249654 5268 Malvidae View MSA
124066643 5270 Rosid View MSA
123751274 5271 Pentapetalae View MSA
122794411 5272 Eudicot View MSA
121348629 5274 Embryophyte View MSA
123380947 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain