Gene : Thecc1EG037485 T. cacao v1.1

Defline:  (1 of 2) PTHR10772//PTHR10772:SF0 - 10 KDA HEAT SHOCK PROTEIN // 20 KDA CHAPERONIN, CHLOROPLASTIC Genomic Order:  688
Name:  ? Thecc1EG037485 Secondary Identifier:  ? PAC:27426674

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037485 0.5kb upstream 0.5kb upstream 2863 true scaffold_9: 3748598-3751460 Theobroma cacao
Thecc1EG037485 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 3750961-3751460 Theobroma cacao
Thecc1EG037485 0.5kb downstream 0.5kb downstream 2863 true scaffold_9: 3748098-3750960 Theobroma cacao
Thecc1EG037485 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 3748098-3748597 Theobroma cacao
Thecc1EG037485 1.0kb upstream 1.0kb upstream 3363 true scaffold_9: 3748598-3751960 Theobroma cacao
Thecc1EG037485 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 3750961-3751960 Theobroma cacao
Thecc1EG037485 1.0kb downstream 1.0kb downstream 3363 true scaffold_9: 3747598-3750960 Theobroma cacao
Thecc1EG037485 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 3747598-3748597 Theobroma cacao
Thecc1EG037485 2.0kb upstream 2.0kb upstream 4363 true scaffold_9: 3748598-3752960 Theobroma cacao
Thecc1EG037485 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 3750961-3752960 Theobroma cacao
Thecc1EG037485 2.0kb downstream 2.0kb downstream 4363 true scaffold_9: 3746598-3750960 Theobroma cacao
Thecc1EG037485 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 3746598-3748597 Theobroma cacao
Thecc1EG037485 5.0kb upstream 5.0kb upstream 7363 true scaffold_9: 3748598-3755960 Theobroma cacao
Thecc1EG037485 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 3750961-3755960 Theobroma cacao
Thecc1EG037485 5.0kb downstream 5.0kb downstream 7363 true scaffold_9: 3743598-3750960 Theobroma cacao
Thecc1EG037485 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 3743598-3748597 Theobroma cacao
Thecc1EG037485 10.0kb upstream 10.0kb upstream 12363 true scaffold_9: 3748598-3760960 Theobroma cacao
Thecc1EG037485 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 3750961-3760960 Theobroma cacao
Thecc1EG037485 10.0kb downstream 10.0kb downstream 12363 true scaffold_9: 3738598-3750960 Theobroma cacao
Thecc1EG037485 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 3738598-3748597 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836140 5264 Brassicales-Malvales View MSA
124350160 5266 SBM View MSA
124239782 5268 Malvidae View MSA
124064772 5270 Rosid View MSA
123741725 5271 Pentapetalae View MSA
122790070 5272 Eudicot View MSA
122045141 5273 Angiosperm View MSA
121344791 5274 Embryophyte View MSA
123424643 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain