Gene : Thecc1EG037487 T. cacao v1.1
Defline:  (1 of 119) PF00847 - AP2 domain (AP2) Genomic Order:  690
Name:  ? Thecc1EG037487 Secondary Identifier:  ? PAC:27429321
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037487 0.5kb upstream 0.5kb upstream 1322 true scaffold_9: 3761314-3762635 Theobroma cacao
Thecc1EG037487 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 3761314-3761813 Theobroma cacao
Thecc1EG037487 0.5kb downstream 0.5kb downstream 1322 true scaffold_9: 3761814-3763135 Theobroma cacao
Thecc1EG037487 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 3762636-3763135 Theobroma cacao
Thecc1EG037487 1.0kb upstream 1.0kb upstream 1822 true scaffold_9: 3760814-3762635 Theobroma cacao
Thecc1EG037487 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 3760814-3761813 Theobroma cacao
Thecc1EG037487 1.0kb downstream 1.0kb downstream 1822 true scaffold_9: 3761814-3763635 Theobroma cacao
Thecc1EG037487 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 3762636-3763635 Theobroma cacao
Thecc1EG037487 2.0kb upstream 2.0kb upstream 2822 true scaffold_9: 3759814-3762635 Theobroma cacao
Thecc1EG037487 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 3759814-3761813 Theobroma cacao
Thecc1EG037487 2.0kb downstream 2.0kb downstream 2822 true scaffold_9: 3761814-3764635 Theobroma cacao
Thecc1EG037487 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 3762636-3764635 Theobroma cacao
Thecc1EG037487 5.0kb upstream 5.0kb upstream 5822 true scaffold_9: 3756814-3762635 Theobroma cacao
Thecc1EG037487 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 3756814-3761813 Theobroma cacao
Thecc1EG037487 5.0kb downstream 5.0kb downstream 5822 true scaffold_9: 3761814-3767635 Theobroma cacao
Thecc1EG037487 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 3762636-3767635 Theobroma cacao
Thecc1EG037487 10.0kb upstream 10.0kb upstream 10822 true scaffold_9: 3751814-3762635 Theobroma cacao
Thecc1EG037487 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 3751814-3761813 Theobroma cacao
Thecc1EG037487 10.0kb downstream 10.0kb downstream 10822 true scaffold_9: 3761814-3772635 Theobroma cacao
Thecc1EG037487 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 3762636-3772635 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824878 5264 Brassicales-Malvales View MSA
124349388 5266 SBM View MSA
124245840 5268 Malvidae View MSA
124073021 5270 Rosid View MSA
123753311 5271 Pentapetalae View MSA
122788043 5272 Eudicot View MSA
122049310 5273 Angiosperm View MSA
121351578 5274 Embryophyte View MSA
123382234 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain