Gene : Thecc1EG037489 T. cacao v1.1
Defline:  (1 of 4) PTHR23421:SF49 - BETA-GALACTOSIDASE 15-RELATED Genomic Order:  692
Name:  ? Thecc1EG037489 Secondary Identifier:  ? PAC:27425967
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037489 0.5kb upstream 0.5kb upstream 9858 true scaffold_9: 3774297-3784154 Theobroma cacao
Thecc1EG037489 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 3783655-3784154 Theobroma cacao
Thecc1EG037489 0.5kb downstream 0.5kb downstream 9858 true scaffold_9: 3773797-3783654 Theobroma cacao
Thecc1EG037489 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 3773797-3774296 Theobroma cacao
Thecc1EG037489 1.0kb upstream 1.0kb upstream 10358 true scaffold_9: 3774297-3784654 Theobroma cacao
Thecc1EG037489 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 3783655-3784654 Theobroma cacao
Thecc1EG037489 1.0kb downstream 1.0kb downstream 10358 true scaffold_9: 3773297-3783654 Theobroma cacao
Thecc1EG037489 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 3773297-3774296 Theobroma cacao
Thecc1EG037489 2.0kb upstream 2.0kb upstream 11358 true scaffold_9: 3774297-3785654 Theobroma cacao
Thecc1EG037489 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 3783655-3785654 Theobroma cacao
Thecc1EG037489 2.0kb downstream 2.0kb downstream 11358 true scaffold_9: 3772297-3783654 Theobroma cacao
Thecc1EG037489 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 3772297-3774296 Theobroma cacao
Thecc1EG037489 5.0kb upstream 5.0kb upstream 14358 true scaffold_9: 3774297-3788654 Theobroma cacao
Thecc1EG037489 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 3783655-3788654 Theobroma cacao
Thecc1EG037489 5.0kb downstream 5.0kb downstream 14358 true scaffold_9: 3769297-3783654 Theobroma cacao
Thecc1EG037489 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 3769297-3774296 Theobroma cacao
Thecc1EG037489 10.0kb upstream 10.0kb upstream 19358 true scaffold_9: 3774297-3793654 Theobroma cacao
Thecc1EG037489 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 3783655-3793654 Theobroma cacao
Thecc1EG037489 10.0kb downstream 10.0kb downstream 19358 true scaffold_9: 3764297-3783654 Theobroma cacao
Thecc1EG037489 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 3764297-3774296 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123823399 5264 Brassicales-Malvales Singleton cluster - no MSA
124319484 5266 SBM Singleton cluster - no MSA
124168029 5268 Malvidae Singleton cluster - no MSA
124074267 5270 Rosid View MSA
123753100 5271 Pentapetalae View MSA
122794326 5272 Eudicot View MSA
122049621 5273 Angiosperm View MSA
121350261 5274 Embryophyte View MSA
123428653 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain