Gene : Thecc1EG037472 T. cacao v1.1
Defline:  (1 of 1) PTHR23426//PTHR23426:SF25 - FERREDOXIN/ADRENODOXIN // ADRENODOXIN HOMOLOG, MITOCHONDRIAL Genomic Order:  676
Name:  ? Thecc1EG037472 Secondary Identifier:  ? PAC:27430091
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY0-1507 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037472 0.5kb upstream 0.5kb upstream 3821 true scaffold_9: 3658375-3662195 Theobroma cacao
Thecc1EG037472 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 3658375-3658874 Theobroma cacao
Thecc1EG037472 0.5kb downstream 0.5kb downstream 3821 true scaffold_9: 3658875-3662695 Theobroma cacao
Thecc1EG037472 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 3662196-3662695 Theobroma cacao
Thecc1EG037472 1.0kb upstream 1.0kb upstream 4321 true scaffold_9: 3657875-3662195 Theobroma cacao
Thecc1EG037472 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 3657875-3658874 Theobroma cacao
Thecc1EG037472 1.0kb downstream 1.0kb downstream 4321 true scaffold_9: 3658875-3663195 Theobroma cacao
Thecc1EG037472 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 3662196-3663195 Theobroma cacao
Thecc1EG037472 2.0kb upstream 2.0kb upstream 5321 true scaffold_9: 3656875-3662195 Theobroma cacao
Thecc1EG037472 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 3656875-3658874 Theobroma cacao
Thecc1EG037472 2.0kb downstream 2.0kb downstream 5321 true scaffold_9: 3658875-3664195 Theobroma cacao
Thecc1EG037472 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 3662196-3664195 Theobroma cacao
Thecc1EG037472 5.0kb upstream 5.0kb upstream 8321 true scaffold_9: 3653875-3662195 Theobroma cacao
Thecc1EG037472 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 3653875-3658874 Theobroma cacao
Thecc1EG037472 5.0kb downstream 5.0kb downstream 8321 true scaffold_9: 3658875-3667195 Theobroma cacao
Thecc1EG037472 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 3662196-3667195 Theobroma cacao
Thecc1EG037472 10.0kb upstream 10.0kb upstream 13321 true scaffold_9: 3648875-3662195 Theobroma cacao
Thecc1EG037472 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 3648875-3658874 Theobroma cacao
Thecc1EG037472 10.0kb downstream 10.0kb downstream 13321 true scaffold_9: 3658875-3672195 Theobroma cacao
Thecc1EG037472 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 3662196-3672195 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836973 5264 Brassicales-Malvales View MSA
124345879 5266 SBM View MSA
124241716 5268 Malvidae View MSA
124067802 5270 Rosid View MSA
123747158 5271 Pentapetalae View MSA
122792160 5272 Eudicot View MSA
122043528 5273 Angiosperm View MSA
121349592 5274 Embryophyte View MSA
123425610 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain