Gene : Thecc1EG037451 T. cacao v1.1
Defline:  (1 of 2) PTHR11353//PTHR11353:SF93 - CHAPERONIN // SUBFAMILY NOT NAMED Genomic Order:  657
Name:  ? Thecc1EG037451 Secondary Identifier:  ? PAC:27425939
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6352 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037451 0.5kb upstream 0.5kb upstream 11926 true scaffold_9: 3534874-3546799 Theobroma cacao
Thecc1EG037451 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 3546300-3546799 Theobroma cacao
Thecc1EG037451 0.5kb downstream 0.5kb downstream 11926 true scaffold_9: 3534374-3546299 Theobroma cacao
Thecc1EG037451 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 3534374-3534873 Theobroma cacao
Thecc1EG037451 1.0kb upstream 1.0kb upstream 12426 true scaffold_9: 3534874-3547299 Theobroma cacao
Thecc1EG037451 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 3546300-3547299 Theobroma cacao
Thecc1EG037451 1.0kb downstream 1.0kb downstream 12426 true scaffold_9: 3533874-3546299 Theobroma cacao
Thecc1EG037451 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 3533874-3534873 Theobroma cacao
Thecc1EG037451 2.0kb upstream 2.0kb upstream 13426 true scaffold_9: 3534874-3548299 Theobroma cacao
Thecc1EG037451 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 3546300-3548299 Theobroma cacao
Thecc1EG037451 2.0kb downstream 2.0kb downstream 13426 true scaffold_9: 3532874-3546299 Theobroma cacao
Thecc1EG037451 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 3532874-3534873 Theobroma cacao
Thecc1EG037451 5.0kb upstream 5.0kb upstream 16426 true scaffold_9: 3534874-3551299 Theobroma cacao
Thecc1EG037451 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 3546300-3551299 Theobroma cacao
Thecc1EG037451 5.0kb downstream 5.0kb downstream 16426 true scaffold_9: 3529874-3546299 Theobroma cacao
Thecc1EG037451 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 3529874-3534873 Theobroma cacao
Thecc1EG037451 10.0kb upstream 10.0kb upstream 21426 true scaffold_9: 3534874-3556299 Theobroma cacao
Thecc1EG037451 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 3546300-3556299 Theobroma cacao
Thecc1EG037451 10.0kb downstream 10.0kb downstream 21426 true scaffold_9: 3524874-3546299 Theobroma cacao
Thecc1EG037451 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 3524874-3534873 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838124 5264 Brassicales-Malvales View MSA
124344561 5266 SBM View MSA
124251287 5268 Malvidae View MSA
124069910 5270 Rosid View MSA
123747253 5271 Pentapetalae View MSA
122794223 5272 Eudicot View MSA
122049046 5273 Angiosperm View MSA
121351376 5274 Embryophyte View MSA
123427544 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain