Gene : Thecc1EG037679 T. cacao v1.1
Defline:  (1 of 1) 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase Genomic Order:  865
Name:  ? Thecc1EG037679 Secondary Identifier:  ? PAC:27429108
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-6556 Theobroma cacao pathologic  
Tcacao PWY-7193 Theobroma cacao pathologic  
Tcacao PWY-7196 Theobroma cacao pathologic  
Tcacao PWY-7199 Theobroma cacao pathologic  
Tcacao PWY-7200 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037679 0.5kb upstream 0.5kb upstream 1865 true scaffold_9: 4744962-4746826 Theobroma cacao
Thecc1EG037679 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 4746327-4746826 Theobroma cacao
Thecc1EG037679 0.5kb downstream 0.5kb downstream 1865 true scaffold_9: 4744462-4746326 Theobroma cacao
Thecc1EG037679 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 4744462-4744961 Theobroma cacao
Thecc1EG037679 1.0kb upstream 1.0kb upstream 2365 true scaffold_9: 4744962-4747326 Theobroma cacao
Thecc1EG037679 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 4746327-4747326 Theobroma cacao
Thecc1EG037679 1.0kb downstream 1.0kb downstream 2365 true scaffold_9: 4743962-4746326 Theobroma cacao
Thecc1EG037679 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 4743962-4744961 Theobroma cacao
Thecc1EG037679 2.0kb upstream 2.0kb upstream 3365 true scaffold_9: 4744962-4748326 Theobroma cacao
Thecc1EG037679 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 4746327-4748326 Theobroma cacao
Thecc1EG037679 2.0kb downstream 2.0kb downstream 3365 true scaffold_9: 4742962-4746326 Theobroma cacao
Thecc1EG037679 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 4742962-4744961 Theobroma cacao
Thecc1EG037679 5.0kb upstream 5.0kb upstream 6365 true scaffold_9: 4744962-4751326 Theobroma cacao
Thecc1EG037679 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 4746327-4751326 Theobroma cacao
Thecc1EG037679 5.0kb downstream 5.0kb downstream 6365 true scaffold_9: 4739962-4746326 Theobroma cacao
Thecc1EG037679 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 4739962-4744961 Theobroma cacao
Thecc1EG037679 10.0kb upstream 10.0kb upstream 11365 true scaffold_9: 4744962-4756326 Theobroma cacao
Thecc1EG037679 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 4746327-4756326 Theobroma cacao
Thecc1EG037679 10.0kb downstream 10.0kb downstream 11365 true scaffold_9: 4734962-4746326 Theobroma cacao
Thecc1EG037679 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 4734962-4744961 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839427 5264 Brassicales-Malvales View MSA
124337492 5266 SBM View MSA
124238889 5268 Malvidae View MSA
124068161 5270 Rosid View MSA
123744425 5271 Pentapetalae View MSA
122793352 5272 Eudicot View MSA
122048037 5273 Angiosperm View MSA
121343942 5274 Embryophyte View MSA
123424852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain