Gene : Thecc1EG037642 T. cacao v1.1
Defline:  (1 of 1) PTHR22942//PTHR22942:SF1 - RECA/RAD51/RADA DNA STRAND-PAIRING FAMILY MEMBER // MITOCHONDRIAL DNA REPAIR PROTEIN RECA HOMOLOG Genomic Order:  830
Name:  ? Thecc1EG037642 Secondary Identifier:  ? PAC:27430877
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037642 0.5kb upstream 0.5kb upstream 5229 true scaffold_9: 4563735-4568963 Theobroma cacao
Thecc1EG037642 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 4563735-4564234 Theobroma cacao
Thecc1EG037642 0.5kb downstream 0.5kb downstream 5229 true scaffold_9: 4564235-4569463 Theobroma cacao
Thecc1EG037642 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 4568964-4569463 Theobroma cacao
Thecc1EG037642 1.0kb upstream 1.0kb upstream 5729 true scaffold_9: 4563235-4568963 Theobroma cacao
Thecc1EG037642 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 4563235-4564234 Theobroma cacao
Thecc1EG037642 1.0kb downstream 1.0kb downstream 5729 true scaffold_9: 4564235-4569963 Theobroma cacao
Thecc1EG037642 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 4568964-4569963 Theobroma cacao
Thecc1EG037642 2.0kb upstream 2.0kb upstream 6729 true scaffold_9: 4562235-4568963 Theobroma cacao
Thecc1EG037642 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 4562235-4564234 Theobroma cacao
Thecc1EG037642 2.0kb downstream 2.0kb downstream 6729 true scaffold_9: 4564235-4570963 Theobroma cacao
Thecc1EG037642 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 4568964-4570963 Theobroma cacao
Thecc1EG037642 5.0kb upstream 5.0kb upstream 9729 true scaffold_9: 4559235-4568963 Theobroma cacao
Thecc1EG037642 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 4559235-4564234 Theobroma cacao
Thecc1EG037642 5.0kb downstream 5.0kb downstream 9729 true scaffold_9: 4564235-4573963 Theobroma cacao
Thecc1EG037642 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 4568964-4573963 Theobroma cacao
Thecc1EG037642 10.0kb upstream 10.0kb upstream 14729 true scaffold_9: 4554235-4568963 Theobroma cacao
Thecc1EG037642 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 4554235-4564234 Theobroma cacao
Thecc1EG037642 10.0kb downstream 10.0kb downstream 14729 true scaffold_9: 4564235-4578963 Theobroma cacao
Thecc1EG037642 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 4568964-4578963 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123828812 5264 Brassicales-Malvales View MSA
124344944 5266 SBM View MSA
124242128 5268 Malvidae View MSA
124060910 5270 Rosid View MSA
123743404 5271 Pentapetalae View MSA
122790818 5272 Eudicot View MSA
122045748 5273 Angiosperm View MSA
121351318 5274 Embryophyte View MSA
123382118 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain