Gene : Thecc1EG037592 T. cacao v1.1
Defline:  (1 of 1) PTHR10052//PTHR10052:SF11 - 60S RIBOSOMAL PROTEIN L18A // SUBFAMILY NOT NAMED Genomic Order:  787
Name:  ? Thecc1EG037592 Secondary Identifier:  ? PAC:27431239
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037592 0.5kb upstream 0.5kb upstream 3455 true scaffold_9: 4310145-4313599 Theobroma cacao
Thecc1EG037592 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 4313100-4313599 Theobroma cacao
Thecc1EG037592 0.5kb downstream 0.5kb downstream 3455 true scaffold_9: 4309645-4313099 Theobroma cacao
Thecc1EG037592 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 4309645-4310144 Theobroma cacao
Thecc1EG037592 1.0kb upstream 1.0kb upstream 3955 true scaffold_9: 4310145-4314099 Theobroma cacao
Thecc1EG037592 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 4313100-4314099 Theobroma cacao
Thecc1EG037592 1.0kb downstream 1.0kb downstream 3955 true scaffold_9: 4309145-4313099 Theobroma cacao
Thecc1EG037592 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 4309145-4310144 Theobroma cacao
Thecc1EG037592 2.0kb upstream 2.0kb upstream 4955 true scaffold_9: 4310145-4315099 Theobroma cacao
Thecc1EG037592 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 4313100-4315099 Theobroma cacao
Thecc1EG037592 2.0kb downstream 2.0kb downstream 4955 true scaffold_9: 4308145-4313099 Theobroma cacao
Thecc1EG037592 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 4308145-4310144 Theobroma cacao
Thecc1EG037592 5.0kb upstream 5.0kb upstream 7955 true scaffold_9: 4310145-4318099 Theobroma cacao
Thecc1EG037592 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 4313100-4318099 Theobroma cacao
Thecc1EG037592 5.0kb downstream 5.0kb downstream 7955 true scaffold_9: 4305145-4313099 Theobroma cacao
Thecc1EG037592 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 4305145-4310144 Theobroma cacao
Thecc1EG037592 10.0kb upstream 10.0kb upstream 12955 true scaffold_9: 4310145-4323099 Theobroma cacao
Thecc1EG037592 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 4313100-4323099 Theobroma cacao
Thecc1EG037592 10.0kb downstream 10.0kb downstream 12955 true scaffold_9: 4300145-4313099 Theobroma cacao
Thecc1EG037592 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 4300145-4310144 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027441 5273 Angiosperm View MSA
123833956 5264 Brassicales-Malvales View MSA
124339129 5266 SBM View MSA
124247978 5268 Malvidae View MSA
124066289 5270 Rosid View MSA
123745455 5271 Pentapetalae View MSA
122796236 5272 Eudicot View MSA
121350597 5274 Embryophyte View MSA
123425775 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain