Gene : Thecc1EG037827 T. cacao v1.1
Defline:  Uncharacterized protein Genomic Order:  1001
Name:  ? Thecc1EG037827 Secondary Identifier:  ? PAC:27428549
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037827 0.5kb upstream 0.5kb upstream 1184 true scaffold_9: 5511789-5512972 Theobroma cacao
Thecc1EG037827 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 5511789-5512288 Theobroma cacao
Thecc1EG037827 0.5kb downstream 0.5kb downstream 1184 true scaffold_9: 5512289-5513472 Theobroma cacao
Thecc1EG037827 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 5512973-5513472 Theobroma cacao
Thecc1EG037827 1.0kb upstream 1.0kb upstream 1684 true scaffold_9: 5511289-5512972 Theobroma cacao
Thecc1EG037827 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 5511289-5512288 Theobroma cacao
Thecc1EG037827 1.0kb downstream 1.0kb downstream 1684 true scaffold_9: 5512289-5513972 Theobroma cacao
Thecc1EG037827 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 5512973-5513972 Theobroma cacao
Thecc1EG037827 2.0kb upstream 2.0kb upstream 2684 true scaffold_9: 5510289-5512972 Theobroma cacao
Thecc1EG037827 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 5510289-5512288 Theobroma cacao
Thecc1EG037827 2.0kb downstream 2.0kb downstream 2684 true scaffold_9: 5512289-5514972 Theobroma cacao
Thecc1EG037827 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 5512973-5514972 Theobroma cacao
Thecc1EG037827 5.0kb upstream 5.0kb upstream 5684 true scaffold_9: 5507289-5512972 Theobroma cacao
Thecc1EG037827 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 5507289-5512288 Theobroma cacao
Thecc1EG037827 5.0kb downstream 5.0kb downstream 5684 true scaffold_9: 5512289-5517972 Theobroma cacao
Thecc1EG037827 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 5512973-5517972 Theobroma cacao
Thecc1EG037827 10.0kb upstream 10.0kb upstream 10684 true scaffold_9: 5502289-5512972 Theobroma cacao
Thecc1EG037827 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 5502289-5512288 Theobroma cacao
Thecc1EG037827 10.0kb downstream 10.0kb downstream 10684 true scaffold_9: 5512289-5522972 Theobroma cacao
Thecc1EG037827 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 5512973-5522972 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792245 5273 Angiosperm View MSA
123822973 5264 Brassicales-Malvales Singleton cluster - no MSA
124319082 5266 SBM Singleton cluster - no MSA
124249561 5268 Malvidae View MSA
124038157 5270 Rosid View MSA
123610673 5271 Pentapetalae View MSA
122797072 5272 Eudicot View MSA
121063488 5274 Embryophyte View MSA
123103232 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain