Gene : Thecc1EG037815 T. cacao v1.1
Defline:  (1 of 1) PTHR11062//PTHR11062:SF84 - EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED // EXOSTOSIN FAMILY PROTEIN Genomic Order:  989
Name:  ? Thecc1EG037815 Secondary Identifier:  ? PAC:27429089
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao PWY-5980 Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037815 0.5kb upstream 0.5kb upstream 5032 true scaffold_9: 5457400-5462431 Theobroma cacao
Thecc1EG037815 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 5461932-5462431 Theobroma cacao
Thecc1EG037815 0.5kb downstream 0.5kb downstream 5032 true scaffold_9: 5456900-5461931 Theobroma cacao
Thecc1EG037815 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 5456900-5457399 Theobroma cacao
Thecc1EG037815 1.0kb upstream 1.0kb upstream 5532 true scaffold_9: 5457400-5462931 Theobroma cacao
Thecc1EG037815 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 5461932-5462931 Theobroma cacao
Thecc1EG037815 1.0kb downstream 1.0kb downstream 5532 true scaffold_9: 5456400-5461931 Theobroma cacao
Thecc1EG037815 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 5456400-5457399 Theobroma cacao
Thecc1EG037815 2.0kb upstream 2.0kb upstream 6532 true scaffold_9: 5457400-5463931 Theobroma cacao
Thecc1EG037815 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 5461932-5463931 Theobroma cacao
Thecc1EG037815 2.0kb downstream 2.0kb downstream 6532 true scaffold_9: 5455400-5461931 Theobroma cacao
Thecc1EG037815 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 5455400-5457399 Theobroma cacao
Thecc1EG037815 5.0kb upstream 5.0kb upstream 9532 true scaffold_9: 5457400-5466931 Theobroma cacao
Thecc1EG037815 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 5461932-5466931 Theobroma cacao
Thecc1EG037815 5.0kb downstream 5.0kb downstream 9532 true scaffold_9: 5452400-5461931 Theobroma cacao
Thecc1EG037815 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 5452400-5457399 Theobroma cacao
Thecc1EG037815 10.0kb upstream 10.0kb upstream 14532 true scaffold_9: 5457400-5471931 Theobroma cacao
Thecc1EG037815 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 5461932-5471931 Theobroma cacao
Thecc1EG037815 10.0kb downstream 10.0kb downstream 14532 true scaffold_9: 5447400-5461931 Theobroma cacao
Thecc1EG037815 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 5447400-5457399 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835027 5264 Brassicales-Malvales View MSA
124345705 5266 SBM View MSA
124243747 5268 Malvidae View MSA
124063167 5270 Rosid View MSA
123741138 5271 Pentapetalae View MSA
122789943 5272 Eudicot View MSA
122046187 5273 Angiosperm View MSA
121349832 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain