Gene : Thecc1EG037807 T. cacao v1.1
Defline:  (1 of 1) PTHR13872//PTHR13872:SF1 - 60S RIBOSOMAL PROTEIN L35 // DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT STT3B Genomic Order:  982
Name:  ? Thecc1EG037807 Secondary Identifier:  ? PAC:27431101
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Tcacao MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Theobroma cacao pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037807 0.5kb upstream 0.5kb upstream 9965 true scaffold_9: 5404928-5414892 Theobroma cacao
Thecc1EG037807 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 5404928-5405427 Theobroma cacao
Thecc1EG037807 0.5kb downstream 0.5kb downstream 9965 true scaffold_9: 5405428-5415392 Theobroma cacao
Thecc1EG037807 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 5414893-5415392 Theobroma cacao
Thecc1EG037807 1.0kb upstream 1.0kb upstream 10465 true scaffold_9: 5404428-5414892 Theobroma cacao
Thecc1EG037807 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 5404428-5405427 Theobroma cacao
Thecc1EG037807 1.0kb downstream 1.0kb downstream 10465 true scaffold_9: 5405428-5415892 Theobroma cacao
Thecc1EG037807 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 5414893-5415892 Theobroma cacao
Thecc1EG037807 2.0kb upstream 2.0kb upstream 11465 true scaffold_9: 5403428-5414892 Theobroma cacao
Thecc1EG037807 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 5403428-5405427 Theobroma cacao
Thecc1EG037807 2.0kb downstream 2.0kb downstream 11465 true scaffold_9: 5405428-5416892 Theobroma cacao
Thecc1EG037807 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 5414893-5416892 Theobroma cacao
Thecc1EG037807 5.0kb upstream 5.0kb upstream 14465 true scaffold_9: 5400428-5414892 Theobroma cacao
Thecc1EG037807 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 5400428-5405427 Theobroma cacao
Thecc1EG037807 5.0kb downstream 5.0kb downstream 14465 true scaffold_9: 5405428-5419892 Theobroma cacao
Thecc1EG037807 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 5414893-5419892 Theobroma cacao
Thecc1EG037807 10.0kb upstream 10.0kb upstream 19465 true scaffold_9: 5395428-5414892 Theobroma cacao
Thecc1EG037807 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 5395428-5405427 Theobroma cacao
Thecc1EG037807 10.0kb downstream 10.0kb downstream 19465 true scaffold_9: 5405428-5424892 Theobroma cacao
Thecc1EG037807 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 5414893-5424892 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041451 5273 Angiosperm View MSA
123829062 5264 Brassicales-Malvales View MSA
124344606 5266 SBM View MSA
124237248 5268 Malvidae View MSA
124062338 5270 Rosid View MSA
123739535 5271 Pentapetalae View MSA
122792930 5272 Eudicot View MSA
121345608 5274 Embryophyte View MSA
123425256 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain