Gene : Thecc1EG037727 T. cacao v1.1

Defline:  (1 of 1) PTHR27003//PTHR27003:SF105//PTHR27003:SF44 - FAMILY NOT NAMED // LEUCINE-RICH REPEAT PROTEIN KINASE-RELATED // LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE MEE39-RELATED Genomic Order:  912
Name:  ? Thecc1EG037727 Secondary Identifier:  ? PAC:27428564

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037727 0.5kb upstream 0.5kb upstream 6720 true scaffold_9: 4979691-4986410 Theobroma cacao
Thecc1EG037727 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 4979691-4980190 Theobroma cacao
Thecc1EG037727 0.5kb downstream 0.5kb downstream 6720 true scaffold_9: 4980191-4986910 Theobroma cacao
Thecc1EG037727 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 4986411-4986910 Theobroma cacao
Thecc1EG037727 1.0kb upstream 1.0kb upstream 7220 true scaffold_9: 4979191-4986410 Theobroma cacao
Thecc1EG037727 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 4979191-4980190 Theobroma cacao
Thecc1EG037727 1.0kb downstream 1.0kb downstream 7220 true scaffold_9: 4980191-4987410 Theobroma cacao
Thecc1EG037727 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 4986411-4987410 Theobroma cacao
Thecc1EG037727 2.0kb upstream 2.0kb upstream 8220 true scaffold_9: 4978191-4986410 Theobroma cacao
Thecc1EG037727 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 4978191-4980190 Theobroma cacao
Thecc1EG037727 2.0kb downstream 2.0kb downstream 8220 true scaffold_9: 4980191-4988410 Theobroma cacao
Thecc1EG037727 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 4986411-4988410 Theobroma cacao
Thecc1EG037727 5.0kb upstream 5.0kb upstream 11220 true scaffold_9: 4975191-4986410 Theobroma cacao
Thecc1EG037727 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 4975191-4980190 Theobroma cacao
Thecc1EG037727 5.0kb downstream 5.0kb downstream 11220 true scaffold_9: 4980191-4991410 Theobroma cacao
Thecc1EG037727 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 4986411-4991410 Theobroma cacao
Thecc1EG037727 10.0kb upstream 10.0kb upstream 16220 true scaffold_9: 4970191-4986410 Theobroma cacao
Thecc1EG037727 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 4970191-4980190 Theobroma cacao
Thecc1EG037727 10.0kb downstream 10.0kb downstream 16220 true scaffold_9: 4980191-4996410 Theobroma cacao
Thecc1EG037727 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 4986411-4996410 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835801 5264 Brassicales-Malvales View MSA
124347507 5266 SBM View MSA
124252395 5268 Malvidae View MSA
124074937 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain