Gene : Thecc1EG037723 T. cacao v1.1

Defline:  (1 of 2) PTHR11014//PTHR11014:SF55 - PEPTIDASE M20 FAMILY MEMBER // IAA-AMINO ACID HYDROLASE ILR1-LIKE 1-RELATED Genomic Order:  908
Name:  ? Thecc1EG037723 Secondary Identifier:  ? PAC:27430398

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Thecc1EG037723 0.5kb upstream 0.5kb upstream 5259 true scaffold_9: 4962124-4967382 Theobroma cacao
Thecc1EG037723 0.5kb upstream 0.5kb upstream 500 false scaffold_9: 4966883-4967382 Theobroma cacao
Thecc1EG037723 0.5kb downstream 0.5kb downstream 5259 true scaffold_9: 4961624-4966882 Theobroma cacao
Thecc1EG037723 0.5kb downstream 0.5kb downstream 500 false scaffold_9: 4961624-4962123 Theobroma cacao
Thecc1EG037723 1.0kb upstream 1.0kb upstream 5759 true scaffold_9: 4962124-4967882 Theobroma cacao
Thecc1EG037723 1.0kb upstream 1.0kb upstream 1000 false scaffold_9: 4966883-4967882 Theobroma cacao
Thecc1EG037723 1.0kb downstream 1.0kb downstream 5759 true scaffold_9: 4961124-4966882 Theobroma cacao
Thecc1EG037723 1.0kb downstream 1.0kb downstream 1000 false scaffold_9: 4961124-4962123 Theobroma cacao
Thecc1EG037723 2.0kb upstream 2.0kb upstream 6759 true scaffold_9: 4962124-4968882 Theobroma cacao
Thecc1EG037723 2.0kb upstream 2.0kb upstream 2000 false scaffold_9: 4966883-4968882 Theobroma cacao
Thecc1EG037723 2.0kb downstream 2.0kb downstream 6759 true scaffold_9: 4960124-4966882 Theobroma cacao
Thecc1EG037723 2.0kb downstream 2.0kb downstream 2000 false scaffold_9: 4960124-4962123 Theobroma cacao
Thecc1EG037723 5.0kb upstream 5.0kb upstream 9759 true scaffold_9: 4962124-4971882 Theobroma cacao
Thecc1EG037723 5.0kb upstream 5.0kb upstream 5000 false scaffold_9: 4966883-4971882 Theobroma cacao
Thecc1EG037723 5.0kb downstream 5.0kb downstream 9759 true scaffold_9: 4957124-4966882 Theobroma cacao
Thecc1EG037723 5.0kb downstream 5.0kb downstream 5000 false scaffold_9: 4957124-4962123 Theobroma cacao
Thecc1EG037723 10.0kb upstream 10.0kb upstream 14759 true scaffold_9: 4962124-4976882 Theobroma cacao
Thecc1EG037723 10.0kb upstream 10.0kb upstream 10000 false scaffold_9: 4966883-4976882 Theobroma cacao
Thecc1EG037723 10.0kb downstream 10.0kb downstream 14759 true scaffold_9: 4952124-4966882 Theobroma cacao
Thecc1EG037723 10.0kb downstream 10.0kb downstream 10000 false scaffold_9: 4952124-4962123 Theobroma cacao

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123824971 5264 Brassicales-Malvales View MSA
124351400 5266 SBM View MSA
124247099 5268 Malvidae View MSA
124073280 5270 Rosid View MSA
123745174 5271 Pentapetalae View MSA
122790280 5272 Eudicot View MSA
122042438 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain